Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1870 ATGGGCTCCATCTCCATCCTCGGGACGACTTCGTCTTCGACGACGTCGTCGAATTCTTCGTCGTCGTCTTCTCTTCCGGCTTCTACTTCATCCACCGAGCCTCCTCCTCCTCAACTCATTGACGCGTCCTTAGCTATCGCTACCAGATCTGAGGCCCACCTGCCGACCCGGGCCGGGTCGGCAGGGGATGCCGCCAAGAAAGGTCAAATTCAGCAGCAATTGTCTATTTCCCCGGCGGCGAACCCGAACCCGCCGAAGAGGTCGACGAAAGATAGGCATACCAAGGTGGATGGGCGTGGCCGGAGAATTCGGATGCCGGCGACGTGTGCAGCTAGGGTTTTTCAATTGACGAGGGAATTGGGGCATAAGTCTGATGGCGAGACGATCGAGTGGCTGCTGCAGCAGGCGGAGCCGGCCATCATTGCAGCCACCGGCACCGGCACGATTCCGGCGAACTACTCGACCCTGAACGTGTCGCTCCGGAGCAGCGGCTCTACGATCTCGGCTCCGCCGTCGAAGTCGGCGCCTCATACTTTTCACGGCGCGTTGGCTCTCGCCGGTCACCATCACCCTTACGAGGAAGCGTTTCAGCACCCTGCTCTGTTAGGGTTTCACCCTCACCACCACCACCATCACCAACAGCAGCAGCAGCAGAATCAGCCGCACCTGATGACTGCGGACCAGATCGCCGAAGCGATGCCAGGGGGCGGCGGAGGTGGCGGGGAGAGTGGAGGCGGCGACACGACCGAGAACTATTTGAGAAAACGCTTCAGAGAAGATCTGTTCAAAGAAGACAACCAATCGCATAACGAAGGCGGAGGAAGCTCCCCGAAGGCGTTCAAGAGCAATTTACAGCAAATTCCGAAGCAACCAGAAGCATCTGGATCTTCAGGCCTTCTTCGTCCGACGAACATCCTCCCCGCCGCCGCCGCCATGTGGGCGGTGGCGCCAGCTCCGACCAGTGGTACCGGCAGCACAATCTGGATGCTGCCAGTGAACGCCGCGGGCGGCGCAGCCGCTGCCGGCGGCTCGGGTCCTTCAACAGAGACTCAAATGTGGCATTTTCCTACTACTCAAAGCTCTGGGAATAACACCTTACAAGCTCCTCTGCATTTCATGCCTCGGTTTAATCTTCCGGGAAGCCTTGAATTTCAGGGCGGTGGTGGTAGAGGAGGTGGTGGTTCTCTGCAGTTAGGTTCAATGATAATGCCTCATCAGCAACCTCCATCTCAGCATCTTGGTCTGGGAATGTCTGAGTCTAATCTGGGTATGTTAGCTGCTCTGAATGCGTACTCCAGAGCTGGAGCAACACAACATTTGATTATTGGCGGTTGA 1335 0.576 MGSISILGTTSSSTTSSNSSSSSSLPASTSSTEPPPPQLIDASLAIATRSEAHLPTRAGSAGDAAKKGQIQQQLSISPAANPNPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANYSTLNVSLRSSGSTISAPPSKSAPHTFHGALALAGHHHPYEEAFQHPALLGFHPHHHHHHQQQQQQNQPHLMTADQIAEAMPGGGGGGGESGGGDTTENYLRKRFREDLFKEDNQSHNEGGGSSPKAFKSNLQQIPKQPEASGSSGLLRPTNILPAAAAMWAVAPAPTSGTGSTIWMLPVNAAGGAAAAGGSGPSTETQMWHFPTTQSSGNNTLQAPLHFMPRFNLPGSLEFQGGGGRGGGGSLQLGSMIMPHQQPPSQHLGLGMSESNLGMLAALNAYSRAGATQHLIIGG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1870 444 ProSiteProfiles TCP domain profile. 89 143 IPR017887 -
Bisa04g1870 444 MobiDBLite consensus disorder prediction 66 84 - -
Bisa04g1870 444 MobiDBLite consensus disorder prediction 1 37 - -
Bisa04g1870 444 MobiDBLite consensus disorder prediction 262 281 - -
Bisa04g1870 444 MobiDBLite consensus disorder prediction 230 250 - -
Bisa04g1870 444 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 433 IPR005333 GO:0003700
Bisa04g1870 444 Pfam TCP family transcription factor 88 219 IPR017887 -
Bisa04g1870 444 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1870 Bisa-ChrBisa04 58480001 58481615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1870 86 421 TCP Transcription Factor Family AT1G35560 46.450 5.82e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bisa04g1870 TCP 7.1e-39 No_clan