LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa04g1835	ATGGATGCTTCCACAATTGTTTGCCTACGCTATGAACTTTGCATTCCAAAAATTCTTACAGCTCCAAGAGAAGTCCTTGTTATGGCGTGGGTATCAGCAGTGGTTTTCGTGCTCCACTCATTTTTTAGTTGGCTACTGATATTGAAGCTGAATTGGGGCCTAACTAGAGCAGCAGTCACTCTCAACACGTCTTGGTGGCTTATTGTCATTGGCCAACTGTTATACATTTTCATCACCAAATCTGATGGTGCTTGGGGTGGCTTCACTTGGCTAGCTTTTGCCTATTTGTTTGGCTTTGTGAAGCTCTCTTTGGCTTCAGCCATCATGCTATGGTACACTACTTCTCTTTCACTTTCATGTACTTCACCGTCCCATCATGCAGTGACTAAACCAGATTGTGCATATGGCATGGCAGCTTGGAGTTTTGAGCAAGAATTATATTGGAGGCTCGAGGAGTTACCTCTGCTGAAACTGAAGAGTTCTATTATTTCCGGCTACCATTGGAACCCTTTAATTCATGCTTTTACTCATGTCCCTCCTTCTGCAATGTTCTTCCCTCTTGCAGAACCTCCTCTGGCCAATATGATAGTGAATCAAATTAATTATTACTTCAGTCAAAAAGGAGATAATAAAACTACTGACATGCTTGTTGGTGATGCATATTCGTGTGTCTGTGTGTTGCCGTCAATCTCATATGCTTTTGGAGAGCATGTGTCATATTTTCAAGGAGCTGTTGATACCAGCACAGTTACTCTCATATGGGCAATGTGTCGTCTACTAAGCAACCCTCGTGTCTTGGAAGAAGCACAGAAAGAATTGGACATTCAAGTTGGGAAAGAAAGAGCTGTGAAAGAAACCGATATAAACAAATTGGTATACCTTCAAGCTATAGTTAAAGAGACACTAAGGTTGCACCACCGGCTTCTCTTTCAGACAGAATATTGCACTGCTGGTGGCTATCACATTAAAAAGGGAACCCGATTGATAACAAACTTGTGGAAGATTCAAACAGACCTCCGCAAAGATGTTCAAACCGGAGAGGCATCAGGAGCCAGCACAGAGAAAGAAGCTGGAGTTGGTTAG	1083	0.4257	MDASTIVCLRYELCIPKILTAPREVLVMAWVSAVVFVLHSFFSWLLILKLNWGLTRAAVTLNTSWWLIVIGQLLYIFITKSDGAWGGFTWLAFAYLFGFVKLSLASAIMLWYTTSLSLSCTSPSHHAVTKPDCAYGMAAWSFEQELYWRLEELPLLKLKSSIISGYHWNPLIHAFTHVPPSAMFFPLAEPPLANMIVNQINYYFSQKGDNKTTDMLVGDAYSCVCVLPSISYAFGEHVSYFQGAVDTSTVTLIWAMCRLLSNPRVLEEAQKELDIQVGKERAVKETDINKLVYLQAIVKETLRLHHRLLFQTEYCTAGGYHIKKGTRLITNLWKIQTDLRKDVQTGEASGASTEKEAGVG	360

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa04g1835	360	Pfam	Cytochrome P450	239	338	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bisa04g1835	360	Gene3D	Cytochrome P450	230	341	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bisa04g1835	360	PANTHER	CYTOCHROME P450 82C3-RELATED	238	338	-	-
	Bisa04g1835	360	SUPERFAMILY	Cytochrome P450	227	338	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa04g1835	Bisa-ChrBisa04	56724817	56733944	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa04g1835	243	347	Cytochrome P450	AT4G31970	46.429	1.54e-25	105