Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1826 ATGGCCGTACTTACAGACTGCTGGCTTATTGCCTACTCACAAGAGATTGTTGATGGACAACCAATTTTTGTTTCTTCAAACTGTCTTCCTATCAAGGCTTTGAACTTTGAACCCGCAGGCCATGCCTTCCATTCTGCTGCCCTCAGACTTCACGGTGTTGAGGAAGATACTGCAGATGTTGACAAAAAAGTGGTTGATGATAAGGAACAGATGTATTATGCACCATCTGATTCTTATAGCAGCAAGAGTAAAAAGAAGTCTGGTGCTGAAGACAAGCAACAAGATCACTATGCATTATTGGGTTTGGGCCATCTTAGGTATCTGGCTACGGAGGATCAAATACGTAAAAGCTATCGTGAAACTGCCTTGAAGTATCATCCTGACAAACAGGGTGCTCTTCTGCTTGCTGAAGAGACTGAAGCTGCAAAACAGGCAAAGAAGGAGGAAATAGAAAGCCACTTCAAGGCAATCCAGGAAGCATATGAGGTGTTGATTGATCCTTTGAAGAGAAGACTTTATGATTCCACTGATGAATTTGATGATGCAATTCCCACTGATTGTGCCCCACAAGACTTTTTCAAAGTGTTTGGTCCTGCTTTTATGAGGAATGGACGGTGGTCAGTTAATCAATCAGTTCCACCTTTAGGAGATGACAATACTCCATTAAAAGAAGTTGATAAGTTCTACGACTTCTGGTACAGCTTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAGTTTGATCTTGAGCAAGCAGAATCTCGAGACCACAAGAGGTGGATGGAAAGGCAGAATGCAAAACTGTCAGAAAAAGCTCGGAAGGAAGAGTATGCACGGATACGTACTCTTGTTGATAATGCTTATAAGAGAGACCCGAGAATATTGAGGAGAAAGGAAGAGGAAAAAGCTGAGAAGCAAAGGAAAAAGGAGGCTAAGTTTCTGGCAAAAAAGTTGCAGGAAGAAGAAGCTGTCAGGATTGCAGAAGAGGAGAGGCGACAGAAAGAGGAGGAAGAGAAACGAGCTGCAGAAGCTGCTTTACAACAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGGAAGGAGCGAACTCGTCTTCGAACACTTTCAGCACCTATTGTGTCGCAGCATGAACTTGACATATCTGAGGATGATGTAGAAAGTCTGTGCATGTCACTTGACACTGAGCAGCTGAGGAGTTTGTGCCAGAAAATGGAAGGCAAAGCGGTGTTGGAGCAAGCAGGAGTTGTAAGAGATGCTCTTGGTTCGAAGAAAGATGCGGATGGTAAGAAAGAGGAGAAATCTGAAAAACAGGATGGTTTGGTAAGGGCTAATGGTAGTGTCTCACTAAGCAACAACAATGAGAAGAAGGAGAAACTGTGGAATAAAGAAGAGATCGAGCTATTGAGAAAAGGAATGCAAAAATATCCTAAAGGAACTTCACGGAGGTGGGAGGTCATTTCAGAGTACATTGGTACAGGTAGATCTGTGGAAGAAATTATGAAGGCAACCAAAACAGTCCTCCTTCAGAAGCCTGATTCTTCTAAATCGTTTGATGCATTCCTCGAGAAAAGGAAGCCTGCACCATCAATTGCATCTCCGCTCACAACCCGAGAAGAATTAGTTGGAGAATCAACTCCAGGGAGGCCCGAAAACAATGCTACCTCAACAATGAATAGCTTTGAAGATTCTCATGGTAAAATTACTTCAGACGGCCCGAACTCCAGTGGTTTGGCTACTGCAAATGGAGTTTCCTCTAGTTCAGAGCAAGATGTTTGGTCTTCTGTACAGGAAAGAGCACTGGTCCAGGCTCTAAAAGCCTTCCCCAAGGAAACTAGCCAGAGATGGGAACGAGTGGCAGCTGCTGTTCCTGGGAAGACTGTGAATCAGTGCAAGAAAAAATTTGCAATGTTGAAGGAGAACTTCAGAAACAAGAAGAGTGCAGTTTAA 1950 0.4349 MAVLTDCWLIAYSQEIVDGQPIFVSSNCLPIKALNFEPAGHAFHSAALRLHGVEEDTADVDKKVVDDKEQMYYAPSDSYSSKSKKKSGAEDKQQDHYALLGLGHLRYLATEDQIRKSYRETALKYHPDKQGALLLAEETEAAKQAKKEEIESHFKAIQEAYEVLIDPLKRRLYDSTDEFDDAIPTDCAPQDFFKVFGPAFMRNGRWSVNQSVPPLGDDNTPLKEVDKFYDFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLSEKARKEEYARIRTLVDNAYKRDPRILRRKEEEKAEKQRKKEAKFLAKKLQEEEAVRIAEEERRQKEEEEKRAAEAALQQKKVKEKEKKLLRKERTRLRTLSAPIVSQHELDISEDDVESLCMSLDTEQLRSLCQKMEGKAVLEQAGVVRDALGSKKDADGKKEEKSEKQDGLVRANGSVSLSNNNEKKEKLWNKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKSFDAFLEKRKPAPSIASPLTTREELVGESTPGRPENNATSTMNSFEDSHGKITSDGPNSSGLATANGVSSSSEQDVWSSVQERALVQALKAFPKETSQRWERVAAAVPGKTVNQCKKKFAMLKENFRNKKSAV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1826 649 CDD SANT 593 639 IPR001005 -
Bisa04g1826 649 MobiDBLite consensus disorder prediction 421 456 - -
Bisa04g1826 649 ProSiteProfiles Myb-like domain profile. 453 508 IPR001005 -
Bisa04g1826 649 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 9 648 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Bisa04g1826 649 Coils Coil 301 364 - -
Bisa04g1826 649 PRINTS DnaJ domain signature 100 118 IPR001623 -
Bisa04g1826 649 PRINTS DnaJ domain signature 149 169 IPR001623 -
Bisa04g1826 649 PRINTS DnaJ domain signature 118 133 IPR001623 -
Bisa04g1826 649 SUPERFAMILY Homeodomain-like 591 646 IPR009057 -
Bisa04g1826 649 ProSiteProfiles Myb-like domain profile. 585 639 IPR001005 -
Bisa04g1826 649 Gene3D - 583 649 - -
Bisa04g1826 649 ProSiteProfiles dnaJ domain profile. 95 177 IPR001623 -
Bisa04g1826 649 MobiDBLite consensus disorder prediction 548 590 - -
Bisa04g1826 649 CDD DnaJ 95 166 IPR001623 -
Bisa04g1826 649 FunFam Myb family transcription factor 587 647 - -
Bisa04g1826 649 Gene3D - 453 511 - -
Bisa04g1826 649 SUPERFAMILY Homeodomain-like 457 502 IPR009057 -
Bisa04g1826 649 SMART dnaj_3 94 169 IPR001623 -
Bisa04g1826 649 CDD SANT 461 502 IPR001005 -
Bisa04g1826 649 Pfam Myb-like DNA-binding domain 592 638 IPR001005 -
Bisa04g1826 649 SUPERFAMILY Chaperone J-domain 93 201 IPR036869 -
Bisa04g1826 649 MobiDBLite consensus disorder prediction 528 590 - -
Bisa04g1826 649 ProSiteProfiles SANT domain profile. 588 643 IPR017884 -
Bisa04g1826 649 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Bisa04g1826 649 MobiDBLite consensus disorder prediction 421 440 - -
Bisa04g1826 649 MobiDBLite consensus disorder prediction 330 354 - -
Bisa04g1826 649 Pfam DnaJ domain 95 174 IPR001623 -
Bisa04g1826 649 SMART sant 457 510 IPR001005 -
Bisa04g1826 649 SMART sant 589 641 IPR001005 -
Bisa04g1826 649 Gene3D DnaJ domain 78 186 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1826 Bisa-ChrBisa04 56271637 56273586 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1826 96 295 C2H2 Transcription Factor Family AT1G74250 28.452 9.63e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa04g1826 DnaJ 9.3e-18 CL0392