Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1819 ATGGCCTGCCAGCTTATTGCCTACTCGCAGGAGATTGTTGATGGACAGCCAATTTTTGTTTCATCAAACTGTCTTCCTATCAAAGCTTTGAACTTTGAACCTGCAGGCCACGCTTTCCATTCTGCTGCCCTTAGACTTCGTGGTGTTGAGGAAGATACTGTAGATAGTAATGAGAAGAAAGTGGTTGATGATAAGGAACAGATGTATTATGCATCATCTGATTCTTACAGCAGCAAGAGTAAAAAGAAATCTGGTGCTGGAGACAAGCAACAAGATCACTATGCATTATTGGGTTTGGGCCATCTAAGGTATCTGGCTACGGAGGATCAAATACGTAAAAGCTATCGTGAAACTGCCTTGAAATATCATCCTGACAAACAGGCTGCTCTTTTGCTTGCTGAGGGGACTGAAGCTGCGAAACAGGCAAAGAAGGATGAAATAGAAAGTCACTTCAAGGCAATCCAGGAAGCATATGAGTTGTTGATTGATCCTTTGAAGAGAAGACTTTATGATTCCACTGATGAATTTGACGATGCAATTCCCACTGACTGCGCCCCACAAGACTTTTTCAAAGTGTTTGGTCCTGCTTTTATGAGGAATGGACGGTGGTCAGTTAATCAACCAATTCCACCTTTAGGAGATGACAATACTCCGTTAAAAGAAGTTGATAAGTTCTATGACTTCTGGTACAGCTTTAAAAGCTGGAGGGAGTTTCCTCATGCTGATGAGTTTGATCTTGAGCAAGCGGAATCTCGAGACCACAAGAGGTGGATGGAAAGGCAGAATGCAAAACTGTCAGAAAAAGCTCGGAAGGAAGAGTATGCACGGATACGTACTCTTGTTGATAATGCTTATAAGAGAGACCCGAGAATACTGAGGAGAAAGGAAGAGGAAAAAGCTGAGAAGCAAAGGAAAAAGGAGGCTAAGTTTCTGGCAAAAAAGTTGCAGGAAGAAGAAGCTGTCAGGATTGCAGAAGAGGAGAGGCGACGGAAAGAGGAGGAAGAGAAACGAGCTGCAGAAGCTGCTTTACAACAAAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGGAAGGAGCGAACTCGTCTTCGAACACTTTCAGCACCTATTGTGTCGCAGCATGTACTTGACATATCTGAGGATGATGTCGAAAGTCTGTGCATGTCACTTGATACTGAGCAGCTGAGGAGTTTGTGCCAGAGAATGGAAGGCAAAGCGGAGTTGGAGCAAGCAGAATTTGTAATAGATTCTCTTGGTTCTAAGAAAGATGTAGATGGTAAGAAAGAGGAGAAAACTGAAAAACAGGATAGTTTGGCAAGGGGTAATGGTAGTGCTTCCCTAAGTAACAACAATGAGAAGAAGGAGAAACCATGGAGTAAAGAAGAGATCGAGCTATTGAGAAAAGGAATGCAAAAATATCCTAAAGGAACTTCACGGAGGTGGGAGGTCATTTCAGAGTACATTGGTACAGGCAGATCCGTGGAAGAAATCATGAAGGCAACCAAAACAGTTCTCCTTCAGAAGCCTGATTCTTCAAAATCATTTGATGCATTCCTTGAGAAAAGGAAACCTGCACCATCAATTGCATCTCCGCTTACAACCCGAGAAGAATTAGGAGAATCCACTCCAGGGAGGCCCGAAAACAACGCTACCTCAACAACGAATAACTTGGAAGAATCTCATGGCAAAAGCACTTCAGACAGCCTGAGCTCCACTGGTTCAGCTACTGCAAATGGGGTTTCCTCTAGTTCAGGGCAAGATGCTTGGTCTGCTGTACAGGAAAAAGCACTGGTCCAGGCTCTGAAAGCCTTCCCCAAGGAAACTAGCCAGAGATGGGAACGAGTTGCGGCCGCTGTTCCTGGGAAGACTATGAATCAGTGCAAGAAAAAATTTGCAATGTTGAAGGAGAACTTCAGAAACAAGAAAAGTGCAGTATAA 1938 0.437 MACQLIAYSQEIVDGQPIFVSSNCLPIKALNFEPAGHAFHSAALRLRGVEEDTVDSNEKKVVDDKEQMYYASSDSYSSKSKKKSGAGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALKYHPDKQAALLLAEGTEAAKQAKKDEIESHFKAIQEAYELLIDPLKRRLYDSTDEFDDAIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPPLGDDNTPLKEVDKFYDFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLSEKARKEEYARIRTLVDNAYKRDPRILRRKEEEKAEKQRKKEAKFLAKKLQEEEAVRIAEEERRRKEEEEKRAAEAALQQKKVKEKEKKLLRKERTRLRTLSAPIVSQHVLDISEDDVESLCMSLDTEQLRSLCQRMEGKAELEQAEFVIDSLGSKKDVDGKKEEKTEKQDSLARGNGSASLSNNNEKKEKPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKSFDAFLEKRKPAPSIASPLTTREELGESTPGRPENNATSTTNNLEESHGKSTSDSLSSTGSATANGVSSSSGQDAWSAVQEKALVQALKAFPKETSQRWERVAAAVPGKTMNQCKKKFAMLKENFRNKKSAV 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1819 645 Gene3D DnaJ domain 88 205 IPR036869 -
Bisa04g1819 645 MobiDBLite consensus disorder prediction 419 437 - -
Bisa04g1819 645 ProSiteProfiles SANT domain profile. 584 639 IPR017884 -
Bisa04g1819 645 ProSiteProfiles Myb-like domain profile. 581 635 IPR001005 -
Bisa04g1819 645 Pfam DnaJ domain 92 171 IPR001623 -
Bisa04g1819 645 CDD DnaJ 92 163 IPR001623 -
Bisa04g1819 645 ProSiteProfiles Myb-like domain profile. 450 505 IPR001005 -
Bisa04g1819 645 MobiDBLite consensus disorder prediction 325 351 - -
Bisa04g1819 645 SUPERFAMILY Homeodomain-like 456 500 IPR009057 -
Bisa04g1819 645 SMART dnaj_3 91 166 IPR001623 -
Bisa04g1819 645 FunFam Myb family transcription factor 583 643 - -
Bisa04g1819 645 Gene3D - 450 508 - -
Bisa04g1819 645 MobiDBLite consensus disorder prediction 544 589 - -
Bisa04g1819 645 Pfam Myb-like DNA-binding domain 456 497 IPR001005 -
Bisa04g1819 645 Pfam Myb-like DNA-binding domain 588 634 IPR001005 -
Bisa04g1819 645 MobiDBLite consensus disorder prediction 438 452 - -
Bisa04g1819 645 SUPERFAMILY Homeodomain-like 587 642 IPR009057 -
Bisa04g1819 645 MobiDBLite consensus disorder prediction 516 589 - -
Bisa04g1819 645 ProSiteProfiles dnaJ domain profile. 92 174 IPR001623 -
Bisa04g1819 645 MobiDBLite consensus disorder prediction 419 460 - -
Bisa04g1819 645 SUPERFAMILY Chaperone J-domain 90 198 IPR036869 -
Bisa04g1819 645 SMART sant 585 637 IPR001005 -
Bisa04g1819 645 SMART sant 454 507 IPR001005 -
Bisa04g1819 645 PRINTS DnaJ domain signature 115 130 IPR001623 -
Bisa04g1819 645 PRINTS DnaJ domain signature 97 115 IPR001623 -
Bisa04g1819 645 PRINTS DnaJ domain signature 146 166 IPR001623 -
Bisa04g1819 645 ProSitePatterns Nt-dnaJ domain signature. 151 170 IPR018253 -
Bisa04g1819 645 Coils Coil 298 361 - -
Bisa04g1819 645 Gene3D - 579 645 - -
Bisa04g1819 645 CDD SANT 588 635 IPR001005 -
Bisa04g1819 645 CDD SANT 457 499 IPR001005 -
Bisa04g1819 645 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 644 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1819 Bisa-ChrBisa04 56174516 56176453 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1819 93 292 C2H2 Transcription Factor Family AT1G74250 28.452 6.36e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa04g1819 DnaJ 1.2e-16 CL0392