Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1815 ATGCATGAAGTATCAGGGGCGAAGAGCTGCGTCTCCGTTTTCTTTCTCCGAAGCACTGTTTCAATGGCATTAGCCATTCTGGTTCTGGAAGTGGAAAATCAAGTAATCATCATTTCTGCTGTTATTAAGAGAAAATGTTATCTGGTTGAAATGGATAATCAAAGTGACAAGGGCGATAAACCTCCATTGAAGGGAGTAAAAGGCATTGTTGAAGAATTAGTTTTCTTGCATGGTGACTTGGATCTACAGATAATAGAAGCAAAGTCTCTTCCAAATTTGGATTTATCAACTGAAACTATGAGAAAATGTTTCACTGCAGGCAACAAGTGCACACCTCCCTTGGTAAAAGGACTGAAGACACGCTCTGGGAAACATAAAATGATCACTAGTGATCCTTATGTCTCTGTCGCCCTGGCAGGGGCTACTGTAGCTCAAACTAAAATTATTCCTAATTGTGAGGATCCTGTGTGGAATGAACATTTTATTGTCCCAGTTGCTCACCCTGTTCAGAAAATTGTGTTTCTTGTAAAAGATGATGATGTTCTTGGGGCTGAACTCATTGGACTAGTGGAGATATCTGTTCAGAAGGTTTTGTCAGGAAATACTATTAATGATTGGTTTCCCATTATTGGCCAGTTTGGAAACTGCTTAAAACCTTATCCTGAGTTGCACATTTCTTTGAAATATATTCCAGTTGGAGACAATAATAGGAAAGATAATAATATGGGGGTTCCTAATACATATTTTCCTCTTCGAAAAGGTGGGAGTGTGACTCTTTATCAAGATGCACATGTACCGGATGGTATATTACCTGAAATTCCACTTGATGGTGGAAAAATCTTTCACCATAGTAAATGTTGGGAGGACATATGCCATGCGATTTTGGAAGCTCACCACCTAATATATATTATAGGATGGTCCATTTACCATCGTATAAAACTTGTCAGAGAACCAACGAAACCCTTACCTGCTGGTGGAGAGCTTTCACTTGGAGAATTGTTAAAATACAAGTCACAAGAAGGGGTTCGTGTGGTTATGCTAATTTGGGATGACAAAACATCACATGACACGTTTTTTTTGAAAACGGATGGTGTCATGCAGACCCATGATGAAGAAACAAAAAAATTCTTTAAAAACTCCACTGTTCATTGTGTGCTTTCTCCACGTTATGCAAGCAGTAAGCTCAGTGTTTTCAAGCAACAGGTTGTGGGAACTCTTTTTACACATCATCAGAAGTGTGTGATTCTTGACACTCAAGCTTCTGGGAACAATAGGAAAATAACTGCTTATATTGGTGGCCTGGATCTATGTGATGGCAGATATGACACTCCTCAGCATCGTCTCTTTGATGATCTTAATACTGTCTTTAAAGATGATTTCCGTAATCCTGTCCTTTCATCGAGTTATACTGCTGGACCAAGAGAACCATGGCATGACTTGCATTGCAAAATTGAGGGTCCAGCTGCATATGATATATTGACAAATTTTGAGCAAAGATGGAGGAAAGCCAAAAAATGGCGTAACTTAAGGCTAAAAAAGGTTACAAATTGGCATGATGATGCTTTGCTAAGGCTGGATCGAATATCATGGATCCTCACACCATCTGCAGGTTCTGATGGTGATGCAGTTGTCCATGTAACTGAAGAAAATGATCCTGAGACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTCAAGGGTTTTCCAAAGGATGTTAAAGAAGCCAAGGCTCAGAACCTTTTCTGTGGGAAAAACTTGAAAGTTGATAAAAGCATCCATGCCGCCTATGTAAATGCAATAAGATCAGCTCAACACTTCATATATATAGAGAATCAGTATTTTCTTGGATCTTCATTTCATTGGCCTTCGTATAAATCTGCAGGTGCAAATAACTTGGTTCCTGTGGAGTTGGCTTTGAAAATTGCCAGCAAGATCAGTGCAAATGAACGCTTTTCTGTGTATATAGTTATCCCATTGTGGCCAGAGGGACATCCATCTAGTGCTGCTGTGCAAGAAATCTTGTTCTGGCAGGAACAAACAATGTCTATGATGTATAGAATTATTGCAGATGCCCTTAAAAAGGCAGGTCTCTCTGATCGTTTTCATCCACGAGATTATCTCAATTTTTACTGCCTTGGAAAGCGGGAACCTCCAATTTCAAATGATCTGGAGATTCATTCATCTGAACACCGTACTTTGGCAGCATTGAGAAAATACAGGCGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATGAATATATAATCATGGGATCTGCAAATATAAACGAGAGATCCTTGGATGGTTCAAGGGACACAGAAATCGCTATGGGTGCTTATCAGCCAAAATATACATGGACAGCAAAGAAGGATCATCCACGTGGCCAGGTGTACGGTTACCGAATGTCCCTGTGGGCTGAACACCTTGGTAGTCTTGAAGATACTGTTAACGAACCAGAGAGCCTGAGATGTATGAGATATGTCAACAACGTTGCCAAACATAACTGGAATGCATTTGTATCTGAGGAAGGAAGAGTAATGTGGGGACACTTGATGCAGTATCCAGTTCAGGTGAGTGCAGATGGAAGAGTGGGTGCACTTCCAGATTATGAGTCATTTCCTGATGTTGGTGGTAAAATTCTTGGATCTCCCAACTCTCTTCCCGATGCACTAACCACATGA 2700 0.4022 MHEVSGAKSCVSVFFLRSTVSMALAILVLEVENQVIIISAVIKRKCYLVEMDNQSDKGDKPPLKGVKGIVEELVFLHGDLDLQIIEAKSLPNLDLSTETMRKCFTAGNKCTPPLVKGLKTRSGKHKMITSDPYVSVALAGATVAQTKIIPNCEDPVWNEHFIVPVAHPVQKIVFLVKDDDVLGAELIGLVEISVQKVLSGNTINDWFPIIGQFGNCLKPYPELHISLKYIPVGDNNRKDNNMGVPNTYFPLRKGGSVTLYQDAHVPDGILPEIPLDGGKIFHHSKCWEDICHAILEAHHLIYIIGWSIYHRIKLVREPTKPLPAGGELSLGELLKYKSQEGVRVVMLIWDDKTSHDTFFLKTDGVMQTHDEETKKFFKNSTVHCVLSPRYASSKLSVFKQQVVGTLFTHHQKCVILDTQASGNNRKITAYIGGLDLCDGRYDTPQHRLFDDLNTVFKDDFRNPVLSSSYTAGPREPWHDLHCKIEGPAAYDILTNFEQRWRKAKKWRNLRLKKVTNWHDDALLRLDRISWILTPSAGSDGDAVVHVTEENDPETWNVQVFRSIDSGSVKGFPKDVKEAKAQNLFCGKNLKVDKSIHAAYVNAIRSAQHFIYIENQYFLGSSFHWPSYKSAGANNLVPVELALKIASKISANERFSVYIVIPLWPEGHPSSAAVQEILFWQEQTMSMMYRIIADALKKAGLSDRFHPRDYLNFYCLGKREPPISNDLEIHSSEHRTLAALRKYRRFMIYVHAKGMIVDDEYIIMGSANINERSLDGSRDTEIAMGAYQPKYTWTAKKDHPRGQVYGYRMSLWAEHLGSLEDTVNEPESLRCMRYVNNVAKHNWNAFVSEEGRVMWGHLMQYPVQVSADGRVGALPDYESFPDVGGKILGSPNSLPDALTT 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1815 899 SMART C2_3c 79 206 IPR000008 -
Bisa04g1815 899 SUPERFAMILY Phospholipase D/nuclease 244 510 - -
Bisa04g1815 899 SUPERFAMILY Phospholipase D/nuclease 582 828 - -
Bisa04g1815 899 PIRSF PLD_plant 67 899 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bisa04g1815 899 Gene3D Endonuclease Chain A 279 523 - -
Bisa04g1815 899 Pfam PLD-like domain 601 781 IPR025202 -
Bisa04g1815 899 Gene3D C2 domain 73 228 IPR035892 -
Bisa04g1815 899 Pfam Phospholipase D C terminal 819 889 IPR024632 -
Bisa04g1815 899 ProSiteProfiles C2 domain profile. 59 207 IPR000008 -
Bisa04g1815 899 FunFam Phospholipase D delta 277 521 - -
Bisa04g1815 899 Pfam C2 domain 78 209 IPR000008 -
Bisa04g1815 899 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 76 232 IPR035892 -
Bisa04g1815 899 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 745 772 IPR001736 GO:0003824
Bisa04g1815 899 Pfam Phospholipase D Active site motif 406 440 IPR001736 GO:0003824
Bisa04g1815 899 Gene3D Endonuclease Chain A 560 797 - -
Bisa04g1815 899 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 405 440 IPR001736 GO:0003824
Bisa04g1815 899 CDD C2_plant_PLD 74 230 - -
Bisa04g1815 899 PANTHER PHOSPHOLIPASE D 71 888 IPR015679 -
Bisa04g1815 899 SMART pld_4 405 440 IPR001736 GO:0003824
Bisa04g1815 899 SMART pld_4 745 772 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1815 Bisa-ChrBisa04 56099673 56145984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1815 72 898 Phospholipase D Gene Family (Wang group) AT2G42010 53.016 0.0 919