Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1812 ATGGAACTTCTGTCTCCAAGTTGTAGTTTTCAGGGTGTTGATTCGGAAGAAAGAAAGGAGAAGAAGGGGATGGAGAAGTACGAGCTGGTGAAGGATATAGGATCTGGGAATTTCGGGGTGGCTAGGCTTATGCGCAACAAAGAGACCAAGGAACTTGTTGCCATGAAGTACATTGAACGAGGTCACAAGATTGATGCGAATGTGGCAAGGGAAATCATAAACCATAGATCTCTTCGTCATCCGAATATAATTCGGTTCAAGGAGGTGGTTTTGACTCCCGCACATCTTGCAATAGTTATGGAGTATGCTGCAGGTGGAGAGCTATTTGAGCGAATATGCAATGCTGGAAGATTCAGTGAAGATGAGGCTAGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAACTACTGTCATTTCATGCAAATCTGCCATCGAGACTTGAAGCTCGAGAACACCTTGTTGGATGGCAGCCCTGCTCCACGTCTGAAAATTTGTGATTTTGGTTATTCCAAGTCATCTCTGCTTCACTCAAGGCCTAAATCAACAGTTGGAACTCCAGCTTACATTGCGCCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGTTGGCAGATGTGTGGTCCTGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAGGACCAAGAGGATCCCAAGAACTTCAGGAAAACCATAAATCGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGTCGACACCTGCTATCTCGCATATTTGTGGCAAATCCAGTGAGGAGAATTACCATCAAGGAAATCAAGTCCCACCCATGGTTTCTAAAGAACTTGCCCAGGGAACTGACAGAAGTGGCTCAAGCCGTCTACTACCGAAAAGGAAACCCAACCTTTTCTCTTCAGTGTGTAGAAGACATCATGAAAATTGTCGAGGAGGCCAAAACTCCACCCCCACCTTCTAGGCCTGTTGGAGGGTTTGGCTGGGGAGGAGAAGAAGAAGAAGAAGACGACGAAGCAAAAGAAGCAGATGCTGCTGCTGAGGTGGGAGAAGAAGAAGATGAGTATGAAAAGAAAGTCAAGGAGGCACAGGCGAGTGGAGAATTTAATGTCAGCTAA 1143 0.4523 MELLSPSCSFQGVDSEERKEKKGMEKYELVKDIGSGNFGVARLMRNKETKELVAMKYIERGHKIDANVAREIINHRSLRHPNIIRFKEVVLTPAHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNYCHFMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANPVRRITIKEIKSHPWFLKNLPRELTEVAQAVYYRKGNPTFSLQCVEDIMKIVEEAKTPPPPSRPVGGFGWGGEEEEEDDEAKEADAAAEVGEEEDEYEKKVKEAQASGEFNVS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1812 380 ProSiteProfiles Protein kinase domain profile. 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1812 380 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Bisa04g1812 380 MobiDBLite consensus disorder prediction 338 359 - -
Bisa04g1812 380 Gene3D Phosphorylase Kinase; domain 1 9 102 - -
Bisa04g1812 380 MobiDBLite consensus disorder prediction 1 21 - -
Bisa04g1812 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Bisa04g1812 380 Pfam Protein kinase domain 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1812 380 PANTHER SERINE/THREONINE KINASE 24 323 - -
Bisa04g1812 380 Coils Coil 354 374 - -
Bisa04g1812 380 SUPERFAMILY Protein kinase-like (PK-like) 19 316 IPR011009 -
Bisa04g1812 380 SMART serkin_6 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1812 380 Gene3D Transferase(Phosphotransferase) domain 1 103 291 - -
Bisa04g1812 380 FunFam Serine/threonine-protein kinase SRK2E 24 102 - -
Bisa04g1812 380 FunFam Serine/threonine-protein kinase SRK2A 103 291 - -
Bisa04g1812 380 MobiDBLite consensus disorder prediction 322 380 - -
Bisa04g1812 380 CDD STKc_SnRK2 26 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1812 Bisa-ChrBisa04 56022682 56028567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1812 21 286 CBL-interacting serine-threonine protein kinases AT2G26980 41.877 1.29e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Bisa04g1812 Pkinase 7.6e-71 CL0016