Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1798 ATGAATAGAATGGGGAGGGGAGGAAGATTCTTGGCCTTTCTCACCACATACTTTGTGCGTCATGGGTTCAGGATCCCAATCCCAATATTTCTCTTGCAATACAATCTGAAACCTCTCTCCTCTTTCTTTCCCTCTTTCTTGGACACATACACATATTTTTTAGGAAGAAAAAAGAAGAGAAGAAAATCAAAGATTTTGTGTTGTAGAATGGAGAGGGATTTCAGCTCAGAGAATGTTGACTTAGCATCTAGCTTGAAGAAGAGAGAGCAGAGACATGAAGATTTAGAAGTTGAAGAAGATTATGAGTCTGCAGATTTCAATCTGCAGAATGTTTCAAAGCTCATTCTTCCTCCTCTGGGAGTTTCAATTCATAACCAGAATAGGGTTTACTCAAAAGGGTGGATCATATCACCATTGGATTCAAGATACAGGTGTTGGGAGAGTTTGATGGTGGTTCTAGTTGCATATTGTGCATGGGTTTATCCCTTTGAAGTTGCTTTTCTGAAATCTCGTCCAATTACGAAACTACACATTGTGGACACCGTTGTTGATCTGTTCTTTGCCGTTGACATTGTTTTGACTTTCTTCCTCGCCTACATCGATCAAACCACCCAACTTCTTGTTCGAGACTCCAGAAAGATTGCTCTCAGGTACGTATCAACATGGTTCATCATGGATGTGGCATCCACCATTCCATATGAAGCTTTAGGGCATTTGTTGAAAGGCAGACACAAAGAGGGTCTTCCTCTTCCTTTCTTGCTCTTAGGCATCCTCAGACTTTGGAGACTCAGAAGGGTCCACCAATACTTCACCAGGCTTGAGAAGGATATCAGGTTCAGCTATTTCTGGGTCAGATGTGCTAGGCTTCTATCTGTGGCATTTTTTGTAGTTCACTGTGGTGGGTGCATCTTCTACCTCATGGCTGATCTCAACCCCCACCATGAAAGGACATGGATTGGATCAGTGGATCCAAACTTCAAAAACAGAAGCACATGGAAGAGATACACGACAACCATGTACTGGTCCATCACCACCTTCACCACTGTGGGTTATGGAGACCTCCATGCTGTGAACTCCATGGAAATGACCTTCACCTTCTTCTTCATGCTCCTCAACCTTGCCCTCACTGCTTACTTCATCGGCAACATCACCAATCTTGTTGTCCAAGGAACATCCCACACCATGGAGTTTAGAAACAGCATTGAAGCAGCATCAAATTTTGTGAGTAGAAATAGGATGCCTCAGAGGTTGAAAGAGCAGATGTTGGGTTACATGTGTGTGAGATATAAAGCAGAGAGGTTGAATCAGAATGGCTTCATTCAGCAGCTTCCAAAATCATTACTCAAAAGCATCTCCCACTACTTGTTCTTCCCAATTGCACACAAACTCTATCTCTTCACTGGTGTCTCTACAGAAACTCTGTTATCCTTGATTACAAAAATGAAGGCAGAGTACATAGCACCAAGAGAGGATGTTATAATGCAAAATGAAGCAGCAGAGGATGTTTACATTATAGTCTCTGGAGAAGTGGAAATCATTGAGTGTGGAAAGGACACTGAGAAACTGTTAGGGACTCTAAAAGAAGGAGACATGTTTGGAGAAGATGGTGCTCTGTGTTGCAGGCCTCACAGCTTCACATACAGGACCAAGACTCTCTCACAGCTCTTGAGGCTCAAAACCACAGATCTCATGGAAACAATGAAGACTAAGGAGGATGACAATAAGCAAATTCTCAGAAATTTCCTTCAGCATTTTAAGAAGATAAAGGATGTGAGTGTTAGAAATTTGGGGGTTGATAAGAGTGAAGAAGAAGAAAAAGAAAATACAAACACGGCTGTGAACTTGTTAACTGTGGCAAGCACAGGAAATGCTGCTTTTCTTGAAGAGCTTTTGAAGGCAGGTTTGGATCCTGGCATTGTAGACTCCAAAGGGAAAACCCCATTGCACATAGCAGCATTAAATGGGCATGAAGAGTGTGTAAAAGTCTTACTAAACCATGGAAGCAATATACACACAAGAGACATCTCTGGTAACACTGCTCTATGGGACGCTATATCATCAAAGCATAACTCCATCTTTAGAATCCTCTATCACCATTTTGCCCTCTCTGATCCACACATAACAGGTGATCTCCTATGTACAGCAGCAGAAAGAAATGACCTAAGAGTGATGAATGAGCTCATAAAGCAAGGCCTAAACATAGAGTCCAAAAACCACCATGGCCTAACAGCAACACAAGTTGCCATGGCACAACATCATGTAGACATGGTTCAGTTTCTTCTCATGAATGGCTCATCAGATGTTGCTAGCGTGCACAACCATGATTTTTCATCTTCAAATATGAATGAAATGCCAGAAAGGCGTGAAACCGAGCACAGGATTAGGGTTTATGAGGGGAAACACAATGAGGTTGTGTTAAGGGGACATGAAGAAGAGGAAAAGAAGATTTTGGGAAGAATTAAGAGACAAAATTGGTTAAGGGTATGTATATATAGAGATAATCCTTTGGTGAGAAGAGAAAAAGGTTGTTTTGAAGGTGGGAAGGTTATAAGATTGCCTAGTTCACTTGAGGAGCTCAAGAGAATAGGAGGGGAAAAGTTAGGGTTCGATGCAAAAGATGCAATGGTGGTGACAGACGGAGGAGCAGAAATAGAATCCATAGATGTGATCAGAGACAATGATAAACTTTTTATTGTTCAATAG 2703 0.4169 MNRMGRGGRFLAFLTTYFVRHGFRIPIPIFLLQYNLKPLSSFFPSFLDTYTYFLGRKKKRRKSKILCCRMERDFSSENVDLASSLKKREQRHEDLEVEEDYESADFNLQNVSKLILPPLGVSIHNQNRVYSKGWIISPLDSRYRCWESLMVVLVAYCAWVYPFEVAFLKSRPITKLHIVDTVVDLFFAVDIVLTFFLAYIDQTTQLLVRDSRKIALRYVSTWFIMDVASTIPYEALGHLLKGRHKEGLPLPFLLLGILRLWRLRRVHQYFTRLEKDIRFSYFWVRCARLLSVAFFVVHCGGCIFYLMADLNPHHERTWIGSVDPNFKNRSTWKRYTTTMYWSITTFTTVGYGDLHAVNSMEMTFTFFFMLLNLALTAYFIGNITNLVVQGTSHTMEFRNSIEAASNFVSRNRMPQRLKEQMLGYMCVRYKAERLNQNGFIQQLPKSLLKSISHYLFFPIAHKLYLFTGVSTETLLSLITKMKAEYIAPREDVIMQNEAAEDVYIIVSGEVEIIECGKDTEKLLGTLKEGDMFGEDGALCCRPHSFTYRTKTLSQLLRLKTTDLMETMKTKEDDNKQILRNFLQHFKKIKDVSVRNLGVDKSEEEEKENTNTAVNLLTVASTGNAAFLEELLKAGLDPGIVDSKGKTPLHIAALNGHEECVKVLLNHGSNIHTRDISGNTALWDAISSKHNSIFRILYHHFALSDPHITGDLLCTAAERNDLRVMNELIKQGLNIESKNHHGLTATQVAMAQHHVDMVQFLLMNGSSDVASVHNHDFSSSNMNEMPERRETEHRIRVYEGKHNEVVLRGHEEEEKKILGRIKRQNWLRVCIYRDNPLVRREKGCFEGGKVIRLPSSLEELKRIGGEKLGFDAKDAMVVTDGGAEIESIDVIRDNDKLFIVQ 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1798 900 Pfam Ankyrin repeats (3 copies) 619 699 IPR002110 GO:0005515
Bisa04g1798 900 FunFam Potassium channel KAT3 145 389 - -
Bisa04g1798 900 Pfam Cyclic nucleotide-binding domain 486 568 IPR000595 -
Bisa04g1798 900 SUPERFAMILY Voltage-gated potassium channels 138 388 - -
Bisa04g1798 900 Gene3D - 612 785 IPR036770 -
Bisa04g1798 900 ProSiteProfiles cAMP/cGMP binding motif profile. 465 584 IPR000595 -
Bisa04g1798 900 ProSiteProfiles Ankyrin repeat profile. 643 675 IPR002110 GO:0005515
Bisa04g1798 900 Gene3D - 145 389 - -
Bisa04g1798 900 PRINTS EAG/ELK/ERG potassium channel family signature 180 190 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g1798 900 PRINTS EAG/ELK/ERG potassium channel family signature 335 352 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g1798 900 PRINTS EAG/ELK/ERG potassium channel family signature 379 388 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g1798 900 PRINTS EAG/ELK/ERG potassium channel family signature 361 372 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g1798 900 PRINTS EAG/ELK/ERG potassium channel family signature 191 200 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa04g1798 900 SUPERFAMILY Ankyrin repeat 593 765 IPR036770 -
Bisa04g1798 900 CDD CAP_ED 465 578 IPR000595 -
Bisa04g1798 900 Pfam Ion transport protein 144 394 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa04g1798 900 SUPERFAMILY cAMP-binding domain-like 392 583 IPR018490 -
Bisa04g1798 900 ProSiteProfiles KHA domain profile. 827 900 IPR021789 -
Bisa04g1798 900 SMART cnmp_10 465 582 IPR000595 -
Bisa04g1798 900 PANTHER POTASSIUM CHANNEL AKT1 108 899 IPR045319 GO:0005249|GO:0006813
Bisa04g1798 900 ProSiteProfiles Ankyrin repeat region circular profile. 643 674 - -
Bisa04g1798 900 FunFam Potassium channel KAT2 453 589 - -
Bisa04g1798 900 Pfam KHA, dimerisation domain of potassium ion channel 827 898 IPR021789 -
Bisa04g1798 900 Gene3D Jelly Rolls 433 610 IPR014710 -
Bisa04g1798 900 PRINTS Ankyrin repeat signature 644 659 IPR002110 GO:0005515
Bisa04g1798 900 PRINTS Ankyrin repeat signature 723 737 IPR002110 GO:0005515
Bisa04g1798 900 SMART ANK_2a 740 770 IPR002110 GO:0005515
Bisa04g1798 900 SMART ANK_2a 643 672 IPR002110 GO:0005515
Bisa04g1798 900 SMART ANK_2a 676 707 IPR002110 GO:0005515
Bisa04g1798 900 SMART ANK_2a 708 736 IPR002110 GO:0005515
Bisa04g1798 900 SMART ANK_2a 608 639 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1798 Bisa-ChrBisa04 55442401 55461789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1798 70 648 Ion Channels AT4G22200 61.618 0.0 740