Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1797 ATGAAGATTGGTCTGGTTCTTCTCTTTCTCTTCTTCTCCCTGCTTCTTACTCCAACCCCAGCAGCCCCTTCTTCTTCTTCTCCGCCCTCTGGGTCTGTTAATGCATCGACATGCCCTATGGATCTGAACTACGTGCTGAGAATCCGATGGAACTCCTCGATGTGCCAGAACTTTCATTCTCTACCATCCCCAAACGACACTCGAGGAAGCTTGTGTTGCCAGACCCTATTATCCCTATTCGGCATAGGGCTCGCTCAACACCTGAAAGAAACCTCCATGTTCAACCTCCCGAATCTCGCGACCTCCACCTCCTGCCTCCGAGACTTCCAATCCAAGCTCTCCTCCCTCTCTCTCGCCGATTCCCTCGCCTTCTCTTGCTTTGATCCTCTTCAATTCGTGATTAGCCCTAACGTCTGCGCGAAAATCCAGACGATCCCAGATTGGGTCAAGGAGCTCGGCGAAACTACGCCGCTTAGCACCGGATGCAGACCGGACCTCTCCGATCTCACCCTCTGCGATGGGTGCTTGGCGGCGGGGCTTCAGGTTCAGCAGAAGCTTACTTCGATTGGCGGTAACTCCTCTCAATCCAAAGATTGCTTTTACTTCGCTATTCTGTATGCCGCTGGTATTGTGAATGAGTATGGCCCTGAGAGTAATGGTGCTGTCACTTGCATCTTTGCATTGTCTGTTTATTCCCCTGTGGGTTCTGGAAAAAAGAGTCAACATCAAGCTCTTGTGTTTGGGCTTACTGGAGCTGGGGTTGGATTGTTGGTCATGTCTGCTTTGTTGGGTCTGTATGTGTGGTATGATAGGAAGTGGAGGAGGAGGAAGCTAGGGGGTTTTGGGTTTGATGATCCTGAAGAACAAGGATCTAGGCCTAGATTGAGGCCAAATACTGGATCAATCTGGTTCAAGATTGAGGAGCTTGAGAAGGCTACTAATAATTTTTCGTCAAAGAACTTCATAGGAAGAGGTGGGTTTGGGATGGTGTACAAGGGAACTTTGTCTGATGGATCAGTGGTTGCAGTCAAAAGGGTTTTGGAATCTGATTTTCAAGGGGATGCTGAGTTCTGTAATGAGGTGGAGATTATCAGTAATCTGAAGCACCGAAATCTGGTGCCGCTTAGAGGGTGTTGTGTGGTTGATGAGGATGTGAATTATGAAGGTCAGAGATACCTTGTTTATGACTACATGCCTAATGGTAACCTTGAAGATCATCTCTTCCTTGATGGCAAACAAATCGCAAATAGATCACTGACTTGGCCAGAGAGAAAAAGCATAATTTTAGATGTGGCTAAGGGTTTGGGTTATTTGCATTATGGAGTTAAGCCTGCAATTTATCACAGAGATATAAAGGCTACAAATATACTACTTGATGCAGAGTTGAGGGCGCGAGTTGCTGATTTTGGGCTCGCTAAGCAGAGCAGGGAAGGTCAGTCTCATCTCACTACTAGAGTGGCTGGAACTCATGGATATCTAGCCCCAGAATACGCTCTTTATGGTCAGCTTACTGAGAAGAGTGATGTCTATAGCTTTGGTGTGGTTGTTCTGGAGATAATGTGTGGAAGAAAAGCTCTTGACCTATCTTCATCAGGATCACCGAGGGCATTCTTGATCACAGATTGGGCATGGTCCTTGGTGAAATCTGGGAACATAGAAGAGGCTTTGGATGCTTCTCTCTTGAAAGATGGGGATTCTCCGAGTTCTAATCCTAAGAGTATAATGGAAAGGTTTTTGCTGGTGGGAATTCTGTGTTCGCATGTAATGGTTGCTCTGAGGCCTACAATAGCAGATGCTCTGAAGATGTTGGAAGGAGATGTTGAAGTTCCACAAATCCCCGATCGGCCTATCCCTCTTGGGCATCCTTCTTTTTACAATGATGGTAATAATACTTTTAGCATATCTCCGGCATTAAGTGGCCCAAAATTGCGCAGTGGAGACATGCTCAGGTAA 1953 0.467 MKIGLVLLFLFFSLLLTPTPAAPSSSSPPSGSVNASTCPMDLNYVLRIRWNSSMCQNFHSLPSPNDTRGSLCCQTLLSLFGIGLAQHLKETSMFNLPNLATSTSCLRDFQSKLSSLSLADSLAFSCFDPLQFVISPNVCAKIQTIPDWVKELGETTPLSTGCRPDLSDLTLCDGCLAAGLQVQQKLTSIGGNSSQSKDCFYFAILYAAGIVNEYGPESNGAVTCIFALSVYSPVGSGKKSQHQALVFGLTGAGVGLLVMSALLGLYVWYDRKWRRRKLGGFGFDDPEEQGSRPRLRPNTGSIWFKIEELEKATNNFSSKNFIGRGGFGMVYKGTLSDGSVVAVKRVLESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVVDEDVNYEGQRYLVYDYMPNGNLEDHLFLDGKQIANRSLTWPERKSIILDVAKGLGYLHYGVKPAIYHRDIKATNILLDAELRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKSGNIEEALDASLLKDGDSPSSNPKSIMERFLLVGILCSHVMVALRPTIADALKMLEGDVEVPQIPDRPIPLGHPSFYNDGNNTFSISPALSGPKLRSGDMLR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1797 650 SUPERFAMILY Protein kinase-like (PK-like) 295 604 IPR011009 -
Bisa04g1797 650 Pfam Protein kinase domain 318 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1797 650 SMART serkin_6 316 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1797 650 Gene3D Phosphorylase Kinase; domain 1 288 397 - -
Bisa04g1797 650 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 398 611 - -
Bisa04g1797 650 CDD STKc_IRAK 322 605 - -
Bisa04g1797 650 ProSiteProfiles Protein kinase domain profile. 316 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1797 650 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Bisa04g1797 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Bisa04g1797 650 Pfam SPARK 34 200 IPR043891 -
Bisa04g1797 650 FunFam probable receptor-like protein kinase At1g11050 282 397 - -
Bisa04g1797 650 Gene3D Transferase(Phosphotransferase) domain 1 398 611 - -
Bisa04g1797 650 PANTHER OS01G0750732 PROTEIN 62 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1797 Bisa-ChrBisa04 55439945 55441897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1797 35 650 Receptor kinase-like Gene Family AT1G11050 67.045 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Bisa04g1797 Pkinase 1.2e-42 CL0016