Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1768 ATGACGCGTCGAAATCGAACCGCTCAATGGATCGAAGAAGACGAAGAAGACGAAGACGGATCCAATTCCTGGATTTCCTTCCGATTCGTGAGAGCCACTCGTCCACAGCGTCAAATTCCCAGATCCACCGGCAACGAAGCCATCAATGGAGGTGACGCAACCATGACATTTCAGAACAATCGACTGGAGCCGCCGGCCACGACGGTGAGACCGACTCGCCCTTTCAGACAAACCGGCAACGAAGTCGTCAATGCGGCTGACGCAACCACGATTTTTCAGACCAACCGGCAGGGACCACAGCCAGCGGCGGATTTCGCGATTGAGGGGCTGCCGACGGTGAGATTGACGGCGACGCAATTGAGGATTGATCCGAATTGCGCCATATGCAAAGACGACTTTGGTGTGGACATGGAGGTGAAGGAATTGCCTTGCAAGCATTTCTATCACTGTGACTGTATTGTTCCATGGCTTCGAATCCAAAATACGTGCCCCATCTGTCGCTATCAGCTTCAAGTGGCCTCAGTTAATCATTTTCATTATGAGAATTATCCACATTTTGGGGATTTTGAATTTGGATTTGAAGAAGCCACGCAGAGTTTGAATTGGCTATGGAGCCAGTTTGCTTCATTCAGACCTTTTCGTGCATTGGTGGATTGGACTCACAGGTACTTCGATTTCCAGGAAAATCATCATCGTGGTGGTCGTGGAGGTATCTCGTGGTGGCGCTCACTGTTTATTATATAG 744 0.4973 MTRRNRTAQWIEEDEEDEDGSNSWISFRFVRATRPQRQIPRSTGNEAINGGDATMTFQNNRLEPPATTVRPTRPFRQTGNEVVNAADATTIFQTNRQGPQPAADFAIEGLPTVRLTATQLRIDPNCAICKDDFGVDMEVKELPCKHFYHCDCIVPWLRIQNTCPICRYQLQVASVNHFHYENYPHFGDFEFGFEEATQSLNWLWSQFASFRPFRALVDWTHRYFDFQENHHRGGRGGISWWRSLFII 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1768 247 SMART ring_2 126 166 IPR001841 -
Bisa04g1768 247 Pfam Ring finger domain 125 167 IPR001841 -
Bisa04g1768 247 ProSiteProfiles Zinc finger RING-type profile. 126 167 IPR001841 -
Bisa04g1768 247 SUPERFAMILY RING/U-box 106 173 - -
Bisa04g1768 247 CDD RING-H2_RNF126-like 125 167 - -
Bisa04g1768 247 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 54 170 - -
Bisa04g1768 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 173 IPR013083 -
Bisa04g1768 247 FunFam E3 ubiquitin-protein ligase RING1-like 89 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1768 Bisa-ChrBisa04 54803074 54805909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1768 98 227 C3H Transcription Factor Family AT1G68180 37.692 1.78e-24 95.9