Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1741 ATGGACAACGTGAAGAAGCCATGGCTATGGCTCTCTGTTCTCGTCCTCTGCTTCTCTTTTCACTTCCACGTCCCTTTTGCAGCTCTCACCGCCATCTCTGCAAATCAGTCTGTTTCCGGCGATCAAACTCTTCTGTCTCAAGGTGGGGTTTTTGAATTGGGATTCTTCAATACAGAAGCTGTGCTTCTGGATAGTGGGAATCTAATTTTAAGAGATAGGCCTGATGCAACAGAGTATCTATGGCAGAGCTTTGATAATCCAACTGATACATGGCTTCCGGGAGCTAAATTTAGATTGAAAAATAAAACAAAACAGACCCAATATCTCACTTCATGGAAGAATAGCGAGGATCCTGCACAAGGCCTCTTCTCTCTAGAACTACACCCAAAAGGACCCAATGCTTATTTACTACTATGTATTAAGTCTAAACCGTACTGGACAGGTGGTCTTTGGGATGGACAGAGCTTCAGCTTGGTCCCTGAAATGTGGTTAAATTATATCAATTTAACATTTGTGTCAAACGAGAATGAGACCTACACTGTGTATAATAGTTCTATTTTATCTCGCCTCGTGGTGCATACCTCCGGGCAGATCATGCAATCGACATGGTTGGAAAGAACCCAGCAATGGATTATCTTCTGGTTACAGCCAAGACGACAATGTGAGGTTTATGCTTTCTGTGGTGCATTTGGACGATGCACTGAGACTTCCATGCCATCCTGTAGTTGTTTGCCTGGGTTTACGCCTAAATTACCAACTGACTGGAATCTGAACGATTCCTCAGGTGGATGTGTGAGGAAGAGAAAGCTACAGTGTGAGAGTTCTGATTCTCTCAAAGGGAAGAAGGATAGGTTTCGATCAATGGCCAATATGCAATTACCTTACGATGCTCCATCTGTGGAAGCAGGGAATGCAGGGGAATGTGAGTCAGCTTGCCTGAACAATTGCTCATGTGCTGCTTATGCATATGATGGTACTGGGTGTTGGACTTGGCACGGTGATCTCTTGAGTGTGCAACAACTTTCTCAAGATGATAGTAGTGGAAAGACTCTATATCTCAAGCTCGCAGCTTCTGAGTTTCCTGATTCTAAAAACAGAAAGGGGATGATTATTGGTATTGTTGCTGGCTCAGTTGGTGGTATAGGTGCCCTTTTGGCCATTCTTCTGTTTGTGATCCACAGGCGAAGAAACAGAATTGGACCAGGAAAATCAGTGGAGGGTTCATTGATGGCGTTTGGGTATAGAGATCTGCGAAATGCAACAAAGAATTTCTCAGAGAAATTGGGAGGAGGAGGTTTTGGTTCTGTATTCAAAGGAACATTCCCAGATTCCGGTGTCATAGCAGTGAAGAAGCTTGAAAGCATTAGCCAAGGAGAGAAGCAGTTCAGAACAGAAGTGAGTACAATAGGGACAATCCAACATGTTAATCTTGTTCGGCTTCGAGGGTTCTGTTCTGACGGAAACAGAAAACTGTTGGTTTATGATTACATGCCAAATAGCTCTTTAGATTCCCATCTGTTTCAGAAGGTATTGGACTGGAAGATGAGATACCAAATTGCTCTTGGAACAGCAAGAGGACTAACTTACCTTCATGAGAAGTGTAGGGACTGTATCATACACTGTGACATCAAGCCAGAGAACATTCTCTTGGATGCTGATTTTTGTCCAAAAGTCGCTGACTTCGGCCTCGCGAAGCTCGTTGGACGGGATTTCAGTAGAGTTCTCACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGATCTCTGGGGTCGCTGTCACAGCCAAAGCTGATGTATACAGCTATGGAATGATGCTTTTTGAGTTTGTATCAGGAAGAAGGAACTCAGAGCCATCCGAAGATGGTAGAGTCAAGTTCTTTCCAACTTTTGCTGCAAATGTGGTAACCCAAGGAGGTAATGTCCTTAGCCTATTAGACCCAAGGTTGGAGGGAAATGCAGACATTGACCGGGTTACTCGTATCATAAAAGTTGCTTCCTGGTGTGTCCAAGATGATGAAACTCACAGGCCAGCCATGCGTCAGGTGGTTCTAATACTTGAGGGAGTGTTGGATGTGAATCCGTCTCCAGTTCCAAGATCTCTCCAGCTGTTTGTTGGAGACCAGGAGGACATAGTGTTCTTCACTGACTCTTCAAGCTCCAACCAGAGCTCACATGTAAGAAGCAATGTTTCGACTTCAACAGCCTTCTCTCAAGCACAAAGCAAAGTCTCATCTGCTACGTCCAATTCTTCAAGAACAAATTAA 2271 0.4417 MDNVKKPWLWLSVLVLCFSFHFHVPFAALTAISANQSVSGDQTLLSQGGVFELGFFNTEAVLLDSGNLILRDRPDATEYLWQSFDNPTDTWLPGAKFRLKNKTKQTQYLTSWKNSEDPAQGLFSLELHPKGPNAYLLLCIKSKPYWTGGLWDGQSFSLVPEMWLNYINLTFVSNENETYTVYNSSILSRLVVHTSGQIMQSTWLERTQQWIIFWLQPRRQCEVYAFCGAFGRCTETSMPSCSCLPGFTPKLPTDWNLNDSSGGCVRKRKLQCESSDSLKGKKDRFRSMANMQLPYDAPSVEAGNAGECESACLNNCSCAAYAYDGTGCWTWHGDLLSVQQLSQDDSSGKTLYLKLAASEFPDSKNRKGMIIGIVAGSVGGIGALLAILLFVIHRRRNRIGPGKSVEGSLMAFGYRDLRNATKNFSEKLGGGGFGSVFKGTFPDSGVIAVKKLESISQGEKQFRTEVSTIGTIQHVNLVRLRGFCSDGNRKLLVYDYMPNSSLDSHLFQKVLDWKMRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLDADFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAVTAKADVYSYGMMLFEFVSGRRNSEPSEDGRVKFFPTFAANVVTQGGNVLSLLDPRLEGNADIDRVTRIIKVASWCVQDDETHRPAMRQVVLILEGVLDVNPSPVPRSLQLFVGDQEDIVFFTDSSSSNQSSHVRSNVSTSTAFSQAQSKVSSATSNSSRTN 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1741 756 PIRSF SRK 57 746 IPR024171 GO:0004674
Bisa04g1741 756 PIRSF SRK 3 60 IPR024171 GO:0004674
Bisa04g1741 756 Pfam S-locus glycoprotein domain 146 250 IPR000858 GO:0048544
Bisa04g1741 756 ProSiteProfiles Protein kinase domain profile. 422 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1741 756 ProSitePatterns Protein kinases ATP-binding region signature. 428 451 IPR017441 GO:0005524
Bisa04g1741 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Bisa04g1741 756 SUPERFAMILY Hairpin loop containing domain-like 282 344 - -
Bisa04g1741 756 FunFam Receptor-like protein kinase 4 390 496 - -
Bisa04g1741 756 Gene3D Transferase(Phosphotransferase) domain 1 497 697 - -
Bisa04g1741 756 PANTHER OS07G0415500 PROTEIN 59 700 - -
Bisa04g1741 756 CDD STKc_IRAK 428 690 - -
Bisa04g1741 756 Pfam Protein kinase domain 425 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1741 756 CDD PAN_AP_plant 269 356 - -
Bisa04g1741 756 SUPERFAMILY Protein kinase-like (PK-like) 403 688 IPR011009 -
Bisa04g1741 756 ProSiteProfiles PAN/Apple domain profile. 272 356 IPR003609 -
Bisa04g1741 756 Gene3D Phosphorylase Kinase; domain 1 390 496 - -
Bisa04g1741 756 SMART ntp_6 280 355 IPR003609 -
Bisa04g1741 756 FunFam Serine/threonine-protein kinase 497 696 - -
Bisa04g1741 756 ProSiteProfiles EGF-like domain profile. 217 253 IPR000742 -
Bisa04g1741 756 Pfam D-mannose binding lectin 57 113 IPR001480 -
Bisa04g1741 756 Pfam PAN-like domain 280 338 IPR003609 -
Bisa04g1741 756 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 118 IPR036426 -
Bisa04g1741 756 SMART serkin_6 422 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1741 Bisa-ChrBisa04 54344838 54347312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1741 403 698 Receptor kinase-like Gene Family AT5G20050 43.038 4.51e-76 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa04g1741 Pkinase 2.6e-46 CL0016