Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1678 ATGGTGGAGAAGGTATGTTTTTCTGCTCAAAAGCGTCTGCACAATAACAGCTTGTCTGGAAACATACCTGTGTCTTTGACTAATGTTGCATCACTGCAAGTCCTTTTTCAAAATAATCCTGGATTAAAACGGCCAGAACCGCCAACATTCCGTCCACTACAGCCAGAGTTCCCTCCACTTCTACCAATTTCTCCAATGCCACCAGCTCCTTCAGAGCGTCCAGAAACACAACCCCCACTTGACTGGCTAGCAAGGAAGCGTATTGCATTGGGAGCTGCTAGGGGACTGGCTTATCTGCATGATCATTGTGACCCGAAGATTATTCATCGTGACGTCAAAACTTCAAATATATTGTTGGATGTGGAATTTGAAGCATTTATTGGAGACTTTGGCTTAGCAAAACTTAGTGGCCATAGAGATACTCATGTTACCACAGCTGTGCGTGGTACGGTTGGGCATATAGCACCAGAGTACTTATCAACTGGAAGACTAACTGAGAAGACTGATGTTTTCGGATATGGTGTTATGCTTCTTGAACTGATAACTGGACAGAGAACTTTTGACCTTGCACGACTTGCCAACAACGATGAAGTCATGTTGCTTGACTGGGTGAAAGGATTTCTGAGAGACAGAAGATTGGAAATATTGGTGGATGCTAATTTAAAGGGAAATTATGATGAGGAGGAGGTTGAGCAGCTAATCCAAGTGTCCTTAATATGCACACAGATGAACCACCCTTTAGAAAGACCCAGAATGTCAGAGGTTGCTGGGATGCTAGAAGGTGATGATTTTTCTGAAAAATGGAGGACATTTTTGCAAAACGAAGAGATGTTTGGGCCACATTTTGATCACACCCATCAAGCCGATGCTAATTGCATAGCAGACTCAACTTCTGAGATCTCACCAGCATAA 912 0.4331 MVEKVCFSAQKRLHNNSLSGNIPVSLTNVASLQVLFQNNPGLKRPEPPTFRPLQPEFPPLLPISPMPPAPSERPETQPPLDWLARKRIALGAARGLAYLHDHCDPKIIHRDVKTSNILLDVEFEAFIGDFGLAKLSGHRDTHVTTAVRGTVGHIAPEYLSTGRLTEKTDVFGYGVMLLELITGQRTFDLARLANNDEVMLLDWVKGFLRDRRLEILVDANLKGNYDEEEVEQLIQVSLICTQMNHPLERPRMSEVAGMLEGDDFSEKWRTFLQNEEMFGPHFDHTHQADANCIADSTSEISPA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1678 303 SUPERFAMILY Protein kinase-like (PK-like) 78 260 IPR011009 -
Bisa04g1678 303 Gene3D Transferase(Phosphotransferase) domain 1 70 279 - -
Bisa04g1678 303 SMART serkin_6 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1678 303 ProSiteProfiles Protein kinase domain profile. 1 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1678 303 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 82 269 - -
Bisa04g1678 303 FunFam Somatic embryogenesis receptor-like kinase 1 69 278 - -
Bisa04g1678 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
Bisa04g1678 303 Pfam Protein kinase domain 86 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1678 Bisa-ChrBisa04 52760798 52765847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1678 59 300 Receptor kinase-like Gene Family AT4G33430 68.163 3.01e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa04g1678 Pkinase 1.9e-24 CL0016