LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa04g1655	ATGTTGAAGAACGTGCAGAGAGATCTTGAGAATGATTGTGATGAAATGGCATCATCTCAGCCAAGGAAAACCTCATCGTGGAAGCCTGACTTCTCCATTGCAACAGCAGGGGTATTGAGTGGGGGTCCAAATGATGTATCTGCAGCCCAATCTCCCTCTTTAGAAAGCTCTGCTGCATCTTCTGAATGCTTAATAAGAACATCTTTAACATATGGTTACCGGAGTTTGGTTTGGCTTAATTCTCCTATAACTAAGGATCTCAGTGTGGGAAGGAGAATAGTACTGGCTTTTCAGACCCTTGGTGTTGTCTTTGGTGATGTTGGGACCATTCCATTGTATACTTTCGGTGTTATGTTTAGAAAAGCTCTAATTAATGACAACGAAGACATTCTTGGAGCATTATCACTTGTTCTGTACACCTTAATCTTGATTACTCTTGTGAAGTATGTCCTGGTTGTTTTGTGGGCCAATGATGGATGTGAAGTTCTGTTGTCTGTTGGTGGTTTAAGAGTTGGAGGAGATGCAATTAAACAAGATGAAGTGGTGATGATTTTTGTTGCCTACCTCATCGTTTTGTTTAGTGTACAGAAGTATGGAACAAGTAAATTGGGTATTCCTGTAGGATCTGCTTTATTCATATGGTTTTGTTCTCTTGCAGGCATTGGTATATACAATCTCATGAAATATGACACCACTGTCTTGAGGGCATTCAATCTAGTTCATATTTATTACTTCTTCAAGAGGAATTCAACTGAAGCATGGCATTGCTATATGGCAGATACACTTCATCATTGTGCTGAGTTTTGTGGTGGTCTTCTTGGGATTGGAATTGACTTTCTTTTCATCAGTTGTGTGGAGTGTGACAGATGGAAGTTGGATAATATTGGTCTTTGCCATAATAATGTTTCTTATAATGTATATATGGAATGGAAGCAAGCTCAATATGTTCCAATTCCTATGGTGCCTCAAAGTGAAAGGTTTCTTTTCCGGAGGGTCTGCCCAAATAGCTACCATATATTTGGTTATATTGCCAGGTATGGACATAAAGATGTTCGCAAAGAAAATCACCAGGCTTTTGAGCAGTTGCTCATTGAGAGCCTGGAGAAGTTTATACGTCGAGAGGCTCAAGAGCGATCACTAGAAAGTGATGGAGATGATGATTCAGATGCAGAGGAAGATAATTCTGCTTCAAGGGTTCTCATAGCTCCCAACGGGAGTGTTTACTACTCCCTTGGTGTTCCCCCTTTGTCTGGTTTCCAGGATACCCACAACCCCATTTTTGCAGAGTAG	1290	0.4062	MLKNVQRDLENDCDEMASSQPRKTSSWKPDFSIATAGVLSGGPNDVSAAQSPSLESSAASSECLIRTSLTYGYRSLVWLNSPITKDLSVGRRIVLAFQTLGVVFGDVGTIPLYTFGVMFRKALINDNEDILGALSLVLYTLILITLVKYVLVVLWANDGCEVLLSVGGLRVGGDAIKQDEVVMIFVAYLIVLFSVQKYGTSKLGIPVGSALFIWFCSLAGIGIYNLMKYDTTVLRAFNLVHIYYFFKRNSTEAWHCYMADTLHHCAEFCGGLLGIGIDFLFISCVECDRWKLDNIGLCHNNVSYNVYMEWKQAQYVPIPMVPQSERFLFRRVCPNSYHIFGYIARYGHKDVRKENHQAFEQLLIESLEKFIRREAQERSLESDGDDDSDAEEDNSASRVLIAPNGSVYYSLGVPPLSGFQDTHNPIFAE	429

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa04g1655	429	MobiDBLite	consensus disorder prediction	1	29	-	-
	Bisa04g1655	429	MobiDBLite	consensus disorder prediction	378	398	-	-
	Bisa04g1655	429	Pfam	K+ potassium transporter	162	255	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa04g1655	429	Pfam	K+ potassium transporter	96	158	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa04g1655	429	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	165	256	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa04g1655	429	MobiDBLite	consensus disorder prediction	1	17	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa04g1655	Bisa-ChrBisa04	52034648	52044487	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa04g1655	314	426	Inorganic Solute Cotransporters	AT5G09400	74.336	4.27e-50	180