Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1644 ATGGTTCAGGCCATTTTTACTGGGAAAAGCTCATGCCACAGAGCAACTTACATTGCTTTCAATTTGAATTTGCATCTCATGGGGCTTTCACTTTTTGTTCTTAAGCAGATTCTCTTGGCAGTTCTTGTTGGTGTCCTATTGAACACAGTTGTCACAGCTCAAGAAGGTCCTTTAGGAAACCAAGCAGAGAAAGATGCTCTTGAAGGTCTCAAGGCCACTTTCAATGACCCTTTTCTGAACGGTAACTGGATTGGTTACCCCTGCAATGTGACAGAACCGTCGAGATGGTTCGGCGTTCGGTGCAGCAACGGCCAAGTCACCAGTATAGTATTGGAAGGAAGGGGCATAGCCGGAAGGATAGATGTCAGAGCATTCGTCAACCTTGGAGAATTGTCTATTTTGAGCTTCAAGAACAATTCCCTAAAGGGAAGTGTGATGGATTTCTCCAACAATCACCAAATGAAGTACATTGACTTGTCTGGAAATGAGTTTGATGGGCCAATATCAAAATCCCTTCTGAGTCTTAACCTCTTGGAAACATTGTTACTTCAAGACAACAATAAGCTCACAGGTCCGATGCCTGGGTTTAATCAACCAAGCTTGAAGATGATCAATGTCTCAAACAATGATCTTCAGGGCAGAATACCAGAAACTCACACTCTGCAATCATTAGGTCCTGAGTCATTTTCTGGCAACCCCCAATTATGTGGTCCTCCTTCTCCCAATTCCTGCAGCTTTAGCTCTTTCTCTAGCTTGACATCTCTTCCAGCACCGGCAGATGACCAAGGAAACGATAATGCCCAGCCCCAGAGCCCGAATGAATCTTCAGACAAAAATCAGACTCCCACTATTCTGATTATTTTCAATGTGGCTCTTCTGTTTGCAATAATCTTGCTAGGGTTTCTTTATTTCAACACAACTAAAAAGCTTAACAAAATAATGAAGCGACAGCAGCTTCACATAGATAAAAATGTGGTGGAGACAGTTGACAAGAAGGTAGAAATGGGAAATCATCAGGTTGAGGAGCCAGTGATGGCAGTTGAAGCGAGAAAGGAGCTAGTGTTCTTTAAGGATGAACCGAAGTTTCAGATAAATGAGCTTTTGAAAGCTTCTGCTGAGGCACTTGGTCAGGGAATCATGGGAAATAGTTACAAGGCTCAGCTGCATGGAGGACCTTCCATTGTTGTAAAGAGGCTAAGGGACTTGAAGCCAATGACCAGGGAGGAGTTTGCAAAGCAATTGAATCTGATTGCTGATCTGAAACACCCAAATTTATTGCCTTTGCTCGCTTACTACCATACCAAAGATGAAAGGCTGCTGCTCTACAGATATGCAGAGAAGGGAAATATTTTCTACCGCCTTCATGGAAAAAGAAGTGGAAACCGTATTCCATTCAATTGGAACTCAAGATTGTTGGTGGCAAAAGGGGTAGCTCGAGCATTATGCTACCTGCATCTCAACGCCAAGTCCCACACCCTCGTCCCCCACGGAAACTTGAAGTCCTCCAATATCCTCCTAGACGAAGACGACACAGTTCTCGTCTCTGACTACGGCCTCTCCTCCCTTATCGCACAACCCATCGCAGCTCAACGCATGGTCGTTTACAAATCCCCCGAATACGGATACGCAAGAAAAGTCACGAAGCAATCTGATGTTTGGAGCTACGGAAGCCTTCTCATAGAACTTTTAACAGGCAGATTATCTGCGTGTTCGGCCCCGCCAGGCGTAAACGGGTCGGATCTCTGCAATTGGGTAAACAGGGCGGTGAGGGAAGAATGGACGGCGGAGATATTCGACAAGGAAATTTCTGTGCACAGAAGCTCTCTTCCCGGGATGCTGAGATTGCTTCAGATTGCGATGCGTTGCACCGACAGGTTCCCGGAGAATCGGCCCGAGATGAGGGAGGTGGTGAGAGAAGTGGAGAAGGTAGAAGCTCCATTGGTGTCTGAAGACGAGGATGATGCATCTGGGGATAGGTCTATAACAGATAGGTCAATGACAGATGATTCTCTCTCGAACTCTATCTCAACCAGTACCTCAGGGATTGTCGGAGATGCCAGGTGGTTGCAGGCTGACAATGAAATCTCTATAGTTCACATTGGTGACCTCGAACAGTGGCAATCGACGATGGTTGATATTTGGCCTCAAGAGGCAGTCGCGGTTTTTCCTGCTCATTCAAGAGTGCCTCTTTTAAGAGCTGTTGAATATATATTTATTTTTTCTCTTTGCAGAGATAGCTTATACTGGTTCTGCTGTCTCATTGAAAATGTTCCAACTGTCACATCATCCCCTATGGCAATCCCAGTCTCTGAATCTTCTGCTCATTATATTTGCATGCATTCAAGAACATACACTATGGCAAGGCACCATTCAAGAGTGGCATCTGTATCTGCTCCATCAGATTTTCTTTTCATGCAGAGATCAAATACGATTGCACAGGGTGTTCTTGGGAACTGGCTGCCTGCCAGATACACGAGTAATATATCATTTGAGCTGAAAACAGACAAGGATATTGTAAGGTTCTCCCTAGGTAACACACCTGATAATAGTAATTCCACCACGAAGGGCAAGAAGAAGAAAAAGGTTAAAATGTCTAGAAAAGCAAAATTGAACGAACTCAGATTCTATCGTTTGAAGGCCAAAAAGAAGATGAACTCCCCAAATCCAGAAGTGAGGATTATATATAAGCTTGAGAAGGCCAAGCGAAAGGAAGCATGGTTGATTGAGAAGCTGAGGAAATTTGAGGTTCCAAAACCCCTGGCAGAAACATATGATCCAGAAATTTTAACAGAGGAAGAGATACATTACCTGAAGCGTACTGGTGAGAAAAAGAAAAACTATGTTCCAGTTGGCAGACGTGGAGTCTTTGGAGGGGTTGTTCTAAACATGCATCTTCACTGGAAGAAGCATGAGACAGTAAAGGTTGTCTGCAAGCCTTGCAGGCCAGGACAGGTTCATCAGTATGCTGAAGAGCTTGCTCAACTGAGCAAAGGGATTGTGATTGACATCAAGCCTAATAATACTATAATTTTTTACCGTGGAAAGAATTATGTACAGCCAAAAGTAATGTCACCTCCTGATACATTATCGAAGGAAAAGGCCTTGCAGAAATATAAGTATGAGCAGTCTCTTGAACATACAAGCCAGTTCATTGAAAAGTTGGAGAAAGAGCTTGACGAGTATCATCAACACCTTGAACGGTTTAAAAAAGGAAGAGAGAATTCACCCAAAAAGAAGAACAGCAGCAAAGAAGCAAAAGATGACAATAGATGGAGACTACTGAAACAACAAATAGTTCTAATGATGCCTTTGGTGGGCTACATTATCAAGTTATGATTATTGAGTTCCTGCCCCACTGTAGGAGGATCTGCTTTGAAGGTTTCTTTACTGCCAATTCATCCTCGCTATGGCATATCATATGGGGGTGGGCAAAGTGCTCTTCATTTTGGTTTTACTGTTTTAGTTGGAAATTGGAGTTGGATATTTGCAACGGAAGTATCAAATATGGAAAACCATGAAATTTGGCAAATATGTGCTCAATACTCTCTCTTACCCAAGTTATGCAGGTAG 3570 0.4345 MVQAIFTGKSSCHRATYIAFNLNLHLMGLSLFVLKQILLAVLVGVLLNTVVTAQEGPLGNQAEKDALEGLKATFNDPFLNGNWIGYPCNVTEPSRWFGVRCSNGQVTSIVLEGRGIAGRIDVRAFVNLGELSILSFKNNSLKGSVMDFSNNHQMKYIDLSGNEFDGPISKSLLSLNLLETLLLQDNNKLTGPMPGFNQPSLKMINVSNNDLQGRIPETHTLQSLGPESFSGNPQLCGPPSPNSCSFSSFSSLTSLPAPADDQGNDNAQPQSPNESSDKNQTPTILIIFNVALLFAIILLGFLYFNTTKKLNKIMKRQQLHIDKNVVETVDKKVEMGNHQVEEPVMAVEARKELVFFKDEPKFQINELLKASAEALGQGIMGNSYKAQLHGGPSIVVKRLRDLKPMTREEFAKQLNLIADLKHPNLLPLLAYYHTKDERLLLYRYAEKGNIFYRLHGKRSGNRIPFNWNSRLLVAKGVARALCYLHLNAKSHTLVPHGNLKSSNILLDEDDTVLVSDYGLSSLIAQPIAAQRMVVYKSPEYGYARKVTKQSDVWSYGSLLIELLTGRLSACSAPPGVNGSDLCNWVNRAVREEWTAEIFDKEISVHRSSLPGMLRLLQIAMRCTDRFPENRPEMREVVREVEKVEAPLVSEDEDDASGDRSITDRSMTDDSLSNSISTSTSGIVGDARWLQADNEISIVHIGDLEQWQSTMVDIWPQEAVAVFPAHSRVPLLRAVEYIFIFSLCRDSLYWFCCLIENVPTVTSSPMAIPVSESSAHYICMHSRTYTMARHHSRVASVSAPSDFLFMQRSNTIAQGVLGNWLPARYTSNISFELKTDKDIVRFSLGNTPDNSNSTTKGKKKKKVKMSRKAKLNELRFYRLKAKKKMNSPNPEVRIIYKLEKAKRKEAWLIEKLRKFEVPKPLAETYDPEILTEEEIHYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVVCKPCRPGQVHQYAEELAQLSKGIVIDIKPNNTIIFYRGKNYVQPKVMSPPDTLSKEKALQKYKYEQSLEHTSQFIEKLEKELDEYHQHLERFKKGRENSPKKKNSSKEAKDDNRWRLLKQQIVLMMPLVGYIIKLXLLSSCPTVGGSALKVSLLPIHPRYGISYGGGQSALHFGFTVLVGNWSWIFATEVSNMENHEIWQICAQYSLLPKLCR 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1644 1189 SMART serkin_6 369 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1644 1189 Gene3D Transferase(Phosphotransferase) domain 1 446 664 - -
Bisa04g1644 1189 MobiDBLite consensus disorder prediction 647 673 - -
Bisa04g1644 1189 Gene3D - 928 1026 IPR035920 -
Bisa04g1644 1189 SMART CRS1_YhbY_2 929 1013 IPR001890 GO:0003723
Bisa04g1644 1189 Gene3D Phosphorylase Kinase; domain 1 336 444 - -
Bisa04g1644 1189 MobiDBLite consensus disorder prediction 1065 1086 - -
Bisa04g1644 1189 Gene3D Ribonuclease Inhibitor 60 246 IPR032675 -
Bisa04g1644 1189 SUPERFAMILY YhbY-like 928 1023 IPR035920 -
Bisa04g1644 1189 Pfam CRS1 / YhbY (CRM) domain 929 1013 IPR001890 GO:0003723
Bisa04g1644 1189 SUPERFAMILY Protein kinase-like (PK-like) 373 644 IPR011009 -
Bisa04g1644 1189 SUPERFAMILY L domain-like 71 239 - -
Bisa04g1644 1189 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 44 645 IPR046959 -
Bisa04g1644 1189 ProSiteProfiles Protein kinase domain profile. 369 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1644 1189 MobiDBLite consensus disorder prediction 215 279 - -
Bisa04g1644 1189 Pfam Protein tyrosine and serine/threonine kinase 373 639 IPR001245 GO:0004672|GO:0006468
Bisa04g1644 1189 MobiDBLite consensus disorder prediction 843 862 - -
Bisa04g1644 1189 ProSiteProfiles CRM domain profile. 927 1024 IPR001890 GO:0003723
Bisa04g1644 1189 Coils Coil 1044 1071 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1644 Bisa-ChrBisa04 51739590 51754970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1644 79 643 Receptor kinase-like Gene Family AT5G05160 34.783 9.97e-91 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa04g1644 PK_Tyr_Ser-Thr 2e-27 CL0016