Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1600 ATGGCTGCTCTGGAGATTGAAACGACGACGTTGGACGTGGAAGCCTCGGGTTCTGCAAGAAGGAACAGTACTGTTAATAGTAATGATATTAATGGAGGAGTAGAAGAAGAGACGGGAATATGTTTGACGTGGAAGGACCTGTGGGTGAGTGCTTCAGGTGGGAGGAAGAAAGGAAGCAAATCAATCCTTGAGGGTTTGAGTGGCTATGCCAAGCCAGGACAGCTCTTGGCCATTATGGGTCCTTCTGGTTCTGGCAAATCTACTCTTCTTGATACTTTAGCAGGGAGATTAGGCACAAACATGAGGCAGATAGGGGAGATTCTGATCAATGGCCGCAAGCAAGCACTGGCTTATGGGACCTCGGCATACGTGATGCAAGACGACACTCTGCTAACAACGCTAACGGTAAGAGAAGCAGTGCTGTACTCAGCGCTGCTTCAGCTTCCGGACTCAATGACGAAGGAAGAGAAGCGGGAGCGAGCGGAGTTCACAATACGGGAGATGGGGCTTCAGGACGCAGTGGACACTAGAATCGGGGGGTCGGGAAGCAAGGGCATAAGCGGCGGGCAGAAGCGGCGCGTGAGCATCTGCATCGAGATCCTCACGCGCCCCAGGCTGCTGTTCCTGGACGAGCCCACCAGCGGCCTCGACAGTGCGGCGTCGTTTTATGTCATGAGCAGAATCGCCAGGCTGGGAGGCATCGACGGCCTTCGCAGGACTATTATTGCGTCCATTCATCAGCCCAGCAGTGAAGTGTTTCAGCTCTTTGATACTCTCTGCCTTCTCTCTGGTGGTAGGACTGTCTACTTTGGCCCTGCTTCTTCTGCATCTGAGTTCTTTGCTTCAACTGGCTTTCCTTGTCCTGCTCTTCAGAACCCTTCTGATCATTTCCTCAAAACTATAAATAAGGATTTCGATCAGGACATTGAAATGGGTTTAGAAGGAACTCAGAGAATGGCCACAGAGGAAGTTATTGATGTTCTTGTGAAGTCATACAAATCATCTGAAATGAGCCAACATGTTCAAAGAGAATTAGCACTGCTATCTGAAAAGGATATAAGTTCAATGGGGAAGAAGAGCGAAGGGCATGCAGGCTTCATTACTCAGTGCCTTGTTCTTACCAAAAGGTCAATGGTGAACATGAGTCGTGACGTCGGCTATTACTGGTTACGCCTTATCATATATGTGCTCATCGCAATCGGTTTGGCTACTATTTACGCTCATATGGACAAAAGCTATCAGTCTATTCAGGATAGAGGCTCAATTATTGCGTTTGTGTCTTCATTCATAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAAGACATGAAGGTATTTCAAAAGGAAAGACTAAATGGGCACTACGGCGTGACAGCATACGTGATAGGAAACACCCTCTCTTCAATCCCTTACCTTATCATCGTCTCTCTGATTCCCGCAGCCATATGCTACTTCCTCCCAGACCTTCAGAAATCATTTGGCCACTTCTTCTACTTCTCATGCGTCCTCTTCGCTTGTCTCATGCTCGTTGAAAGCCTCATGATGATCGTTGCTAGCATCGTCCCTAACTTCCTCATGGGCATCATCACCGGCGCCGGCATCCAAGGCATCATGATCCTCGCCGGCGGCTTCTTCCGGCTGCCCTACGACCTCCCCAAAGTCATCTGGAGATATCCTTTCCACTACATCGCCTTCCACACCTACGCCTACCAGGGACTGTTCAAGAACGAGTTCCTAGGGCTTCATTTTAGGACCGCCAATGGCTCGTCGTTGATTAGTGGGAAAGAGATTTTGAAGACCAGATGGGAAGTCGATATGGGTTTCTCTAAGTGGGTGGATCTTGTGATCTTACTAGGGATGATTGCGTTGTATAGGGTTGTGTTCTTGGCCATTATTAAGGGGACTGAGAAGGTGAAGCCCATTGTTGCGTCTTTGCTTTCTGTGCCTCCTACAAGATCTACTCTTGTCGTCCAAAATCCCGATGCTACTCCTGTACATGGAAATGCTTAA 2016 0.4866 MAALEIETTTLDVEASGSARRNSTVNSNDINGGVEEETGICLTWKDLWVSASGGRKKGSKSILEGLSGYAKPGQLLAIMGPSGSGKSTLLDTLAGRLGTNMRQIGEILINGRKQALAYGTSAYVMQDDTLLTTLTVREAVLYSALLQLPDSMTKEEKRERAEFTIREMGLQDAVDTRIGGSGSKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASFYVMSRIARLGGIDGLRRTIIASIHQPSSEVFQLFDTLCLLSGGRTVYFGPASSASEFFASTGFPCPALQNPSDHFLKTINKDFDQDIEMGLEGTQRMATEEVIDVLVKSYKSSEMSQHVQRELALLSEKDISSMGKKSEGHAGFITQCLVLTKRSMVNMSRDVGYYWLRLIIYVLIAIGLATIYAHMDKSYQSIQDRGSIIAFVSSFITFMTIGGFPSFVEDMKVFQKERLNGHYGVTAYVIGNTLSSIPYLIIVSLIPAAICYFLPDLQKSFGHFFYFSCVLFACLMLVESLMMIVASIVPNFLMGIITGAGIQGIMILAGGFFRLPYDLPKVIWRYPFHYIAFHTYAYQGLFKNEFLGLHFRTANGSSLISGKEILKTRWEVDMGFSKWVDLVILLGMIALYRVVFLAIIKGTEKVKPIVASLLSVPPTRSTLVVQNPDATPVHGNA 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1600 671 Pfam ABC-2 type transporter 368 580 IPR013525 GO:0016020|GO:0140359
Bisa04g1600 671 FunFam ABC transporter G family member 11 40 331 - -
Bisa04g1600 671 Pfam ABC transporter 64 214 IPR003439 GO:0005524
Bisa04g1600 671 Gene3D - 33 284 IPR027417 -
Bisa04g1600 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 29 648 - -
Bisa04g1600 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 280 IPR027417 -
Bisa04g1600 671 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524|GO:0016887
Bisa04g1600 671 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 289 IPR003439 GO:0005524
Bisa04g1600 671 SMART AAA_5 72 266 IPR003593 GO:0016887
Bisa04g1600 671 Pfam ABC-2 type transporter 246 301 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1600 Bisa-ChrBisa04 49888421 49896749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1600 73 231 Calmodulin-binding Proteins AT2G36910 31.928 1.92e-10 62.4