Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1563 ATGACGACGTCGCTTATGGTACCACCTGGGCATAGGTTTGTTCCCACAGATGAAGAACTGGTTGGGTATTATCTCTATAATAAGATCACAGGCATTGCATTCCCTGAGGGAGTGATTCCAGAGTGTGATCTCTATGGGCCCCACAACCCCTGGGATATCTGGCACCTCCATCGCGACCGGGTGGTCAAGACGGCTGCCGGAGAGGACCTCTACTTGTTCACACAGCTCAAGAGGAAGACCCTTGGCGCCAAGCGTGTTGAGAGGAGGGTGGGGATGGGCACATGGGAGGGTGAAGCCGCTGCCAAGAAAGTCTATACGATGCTTCTTGGGACTCGCCAGTGCATAGGCTTCATGAAGAGATTTCGGTTTGAGAAGAGTCAAACTCATCACGACGGCGCGTGGATCATGCACGAGTACTCTCTCGATTACGACTCTCTTTTACCTCCCAACTTTCAACTCCAAAAGGAGGAGTATGTTATTTGTCGAATTCGGAAAAATAAAAGAACGATGGTAGACCAGAATAATGAGCAGAATAATGAATATCATCCTCAAACGAATATTAACTCAGAGGACCTTGACTCAGTCCTTGCGTCAGCCCTCATCAACATAGAAGCAACACTGAATGAACCTGAAGATATTTTATGTGCTGATCATCAAACTCAATTTGAAACGGAGAACGCAGATGATAATATTTCATACTGGAAAAAGGTGCACGATACATTTGACATTTCAGACGATTAA 741 0.4642 MTTSLMVPPGHRFVPTDEELVGYYLYNKITGIAFPEGVIPECDLYGPHNPWDIWHLHRDRVVKTAAGEDLYLFTQLKRKTLGAKRVERRVGMGTWEGEAAAKKVYTMLLGTRQCIGFMKRFRFEKSQTHHDGAWIMHEYSLDYDSLLPPNFQLQKEEYVICRIRKNKRTMVDQNNEQNNEYHPQTNINSEDLDSVLASALINIEATLNEPEDILCADHQTQFETENADDNISYWKKVHDTFDISDD 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1563 246 Gene3D NAC domain 16 171 IPR036093 GO:0003677|GO:0006355
Bisa04g1563 246 Pfam No apical meristem (NAM) protein 8 141 IPR003441 GO:0003677|GO:0006355
Bisa04g1563 246 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 183 - -
Bisa04g1563 246 SUPERFAMILY NAC domain 4 165 IPR036093 GO:0003677|GO:0006355
Bisa04g1563 246 ProSiteProfiles NAC domain profile. 7 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1563 Bisa-ChrBisa04 49295659 49296515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1563 1 175 NAC Transcription Factor Family AT5G62380 35.754 1.75e-24 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa04g1563 NAM 5.2e-23 No_clan