Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1541 ATGCAGCAGATTGGGAATGAAGCCAACAGGAAGCTGCGCGATGAAATTACACGCAGAACTCATGAACTGAGGCAGTTGTATGGGGAAGAGCTTCAAGAATCCACATTGGAAGAATTACAGGAACTAGAGGAACTGCTTGAAATGGCTTCGACCCGAGTTTCAAAAGCAAAGGTAACACATGAACAAGGACTATCATCTGAGTCAACGATTTTGTGCAGCTCAACTGATACTTCTCAACCCTATTTGGGTCTTGACATCTCTCTCAAGTTGGGGTTACATCAATCACAACATTCAATTAAGCAGTTGAAAGGCGAAGAGCTTGAAGGATTGAATACAAAAGAATTACAGAGACTGAAGGAACTTTTAGAAACAGGTTTGAGCCGTGTTAATAAAGCAAAGAATGAAATGATGTTGAAAGAGATCGGTGATCTCAAGAGCAAGGTCAGATACGTTCTAAACTTAAACTATTATGTATTGTATATGAAGTCTCATGTATTTCTTGTTATCAATTGA 513 0.3918 MQQIGNEANRKLRDEITRRTHELRQLYGEELQESTLEELQELEELLEMASTRVSKAKVTHEQGLSSESTILCSSTDTSQPYLGLDISLKLGLHQSQHSIKQLKGEELEGLNTKELQRLKELLETGLSRVNKAKNEMMLKEIGDLKSKVRYVLNLNYYVLYMKSHVFLVIN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1541 170 Coils Coil 115 135 - -
Bisa04g1541 170 Coils Coil 32 59 - -
Bisa04g1541 170 Pfam K-box region 87 155 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bisa04g1541 170 Pfam K-box region 10 57 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bisa04g1541 170 ProSiteProfiles K-box domain profile. 78 168 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1541 Bisa-ChrBisa04 48732197 48735692 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1541 1 57 MADS-box Gene Family AT2G22540 43.860 1.68e-06 44.7