Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1498 ATGTTGCAGCTTGCTATTCACCGAGTGAGGAAGTTGAACAATTTGACGCCCCAGATCTTCGCTTTGGGAAGCTTCCAATTCTCAACAGCTGCTGAGCCATCGTCTTCTGGGAAGCGTCATCCGCCGAGGGTTCCTAATCTTATTGGGGGCAGGTTTGTTGACTCAAAATCATCAACATTCATTGATGTTATAAACCCTGCAACACAAGAAGTTGTGTCGCAACTTCCTTTGACTACCGATGAAGAGTTTAAAGCTGCAGTATCTTCAGCTAAGAGAGCTTTCCCATCATGGCGTAACACTCCAATTACCACACGCCAACGTGTTATGCTAAAGCTCCAGGAGCTTATTCGCAGAGATATGGATAAACTTGCTTTGAACGTTACCACCGAACAAGGAAAGACATTGAAGGATGCGCAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAGCATGCTTGCGGGATGGCAACTTTACAAATGGGGGAGTATGTACCTAATGTATCACATGGAATTGATACTTACAGCATTAGAGAACCGCTTGGTGTTTGTGCTGGAATATGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCAGTGGCAGTTACTTGTGGGAATACCTTCATTCTAAAACCATCAGAAAAAGACCCAGGTGCCTCTGTAATGCTTGCAGAATTAGCTTTGGAGGCTGGTTTGCCTGAGGGTGTCTTAAATATTGTTCATGGAACCCATGATATTGTGAATGCTATTTGTGATGATGACGACATCAAAGCTGTATCTTTTGTTGGTTCAAATGTTGCTGGAATGCATATATATTCAAGAGCATCAGCTAAAGGGAAACGTGTTCAATCAAATATGGGAGCAAAAAATCATGCAATTGTCATGCCTGATGCAAACGTTGATGCTACTATAAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGATCAAAGCCATGGGAAACTATATTAGTGGAGCGAGCTAATGCTCTTAAAGTAAGTGCTGGAACTGATCCTGCTGCAGACCTTGGTCCAGTTATCAGCAAACAGGCGAAGGAGCGCATCCACAGATTAATTCAATCTGGTGTTGACAGTGGTGCCAGGCTACTGCTTGATGGAAGAAGTATAGTGGTCCCAGGCTATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATGTCACTGCAAATATGGAGTGCTACAAGGAGGAAATCTTTGGTCCAGTTCTTATTTCAATGGAGGCTGACAGCTTAGAAGAGGCAATAAACATTGTCAACAGAAACAAGTATGGAAATGGCGCTTCTATATTTACTTCATCTGGTGTTACTGCAAGGAAATTTCAAACTGAGATTGAAGCTGGACAGGTGGGCATCAATGTTCCCATTCCAGTTCCTTTGCCCTTTTTCTCGTTTACTGGCAACAAGTCGTCATTTGCAGGCGATCTCAATTTCTATGGCAAGGCTGGGGTTCACTTCTATACTCAGATCAAAACAATAACTCAGCAATGGAAGGATTCTGCTGGGGGTAGCAGAGTTAACATGGCAATGCCTACCTCTCAAAAATCTTGA 1620 0.4346 MLQLAIHRVRKLNNLTPQIFALGSFQFSTAAEPSSSGKRHPPRVPNLIGGRFVDSKSSTFIDVINPATQEVVSQLPLTTDEEFKAAVSSAKRAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVPNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDDIKAVSFVGSNVAGMHIYSRASAKGKRVQSNMGAKNHAIVMPDANVDATINALVAAGFGAAGQRCMALSTVVFVGGSKPWETILVERANALKVSAGTDPAADLGPVISKQAKERIHRLIQSGVDSGARLLLDGRSIVVPGYESGNFIGPTILSDVTANMECYKEEIFGPVLISMEADSLEEAINIVNRNKYGNGASIFTSSGVTARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKSSFAGDLNFYGKAGVHFYTQIKTITQQWKDSAGGSRVNMAMPTSQKS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1498 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 289 489 IPR016163 GO:0016620
Bisa04g1498 539 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 289 489 - -
Bisa04g1498 539 CDD ALDH_F6_MMSDH 44 520 IPR010061 GO:0004491
Bisa04g1498 539 SUPERFAMILY ALDH-like 40 521 IPR016161 GO:0016491
Bisa04g1498 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 9 536 IPR010061 GO:0004491
Bisa04g1498 539 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 48 295 - -
Bisa04g1498 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 48 497 IPR016162 GO:0016491
Bisa04g1498 539 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 46 520 IPR010061 GO:0004491
Bisa04g1498 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 314 325 IPR016160 GO:0016491
Bisa04g1498 539 Pfam Aldehyde dehydrogenase family 52 516 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1498 Bisa-ChrBisa04 47434570 47444562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1498 12 504 Aldehyde Dehydrogenase Gene Family AT2G14170 81.542 0.0 829