Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1484 ATGACATCCTCTAAACAACAAGTGTCATCAACAATGGAGGTATCCCAGTGCAGAAGAAAAACTCGTCTCCTTCCTTGTTTGGCCATAACCAAAATTCTCTTGTTTCTTATTATAATACCTGGTGCAGCCCAGATAACCTTTGACTATCAGCAATTTCTTGACGGAGATTATGAGAACTTGAAGTTGGAGGGACATGTTTATCAGGAAAATGGGGTCCTTCAACTGACCAGGTTAGAAAAAGACAGTGTTGGGAGAGTAACATATGATAAACTGCTGCAACTTTGGGACACGGAGACAAGAAAACTTGCCAACTTCACTAGCCGTTTCACCTTCATCATCAATGCAACAAATAACACTGAACTTGGGGATGGCATCACATTCTTTCTCGCACACCCCAACCTTTCGCTTCCATATCCACCAGATGGCTCCGGTATTGGGCTTTTTAGTCGTCTGCAAGATCCAAATTATCCAAATAAGTATCCATTTGTGGCAGTGGAGTTTGATACCTATCCGAATGACAATGATCCACCATATGATCATGTAGGTATCGATGTCAAAAATATGTGGACTCAATACACAACACGATGGTATAATATAAAAGATGGCAGAAAGTATGATGCTGAAATTAGCTATAATTCTAGCTCATACAAGTTAAATGTCATCTTTACTGGATATAAGGATAATAAAACAGTTCAACAACATTATTCCCATGAAATTGATTTGAGAGACTTCTTGCCAGATAAGGTTCAGTTTGGCTTCTCTTCAGCTACAGGGTATCTTTGGGAGACACATACACTATGTTCTTGGTCCTTCAATTCAAGTCTGGAGATAGGAAGGAACAAGGGTAAAAGCAAGACAATGCTGATCGTTGGGCTAAGCATTGGAGCATGTGTAGTAATTGGTGGGTTATGCTTAGCCTGGGTTGTGATCAGGAAGATGAACTGCAGAACCAAGAAAGATGGCCTCGATCTTTCCTTGGACAATGAATTTGAAAGAAATATGGGACCAAAAAAGTTTTCGTATAACAATCTTGTCAGAGCCACAAACAACTTCGCAGAAGAACAGAAACTTGGAGAGGGAGGTTTTGGCGGGGTCTACAAAGGATTTATGAGAGACTTGAACACATATGTTGCAGTTAAGAAGGTGTCACGAGGATCTAGACAGGGAGTGAAGGAGTATGCCTCTGAAGTAAAAATCATTAGTCAACTAAGGCACAAGAATTTGGTGCAACTCATTGGCTGGTGCCACAAAGGGAATGATCTTCTACTCATTTATGAGTTTATGTCAAATGGAAGCTTAGATTACCATCTGTTTCGAAGCAGAAACCTCTTGTCATGGCCAACCAGATACATTATTGCTCAGGGCCTAGCCTCAGCAATATTATATTTGCATGAAGAGTGGGAGCGATGTGTGGTGCACAGGGACATAAAATCAAGCAACGTTATGTTGGATTCAAATTTCAATGCCAAGCTTGGAGATTTTGGGTTAGCCAGACTAGTAGAACACGGGAAAGCGTCAGAAACAACAATTGTAGCTGGAACAAAGGGATACATGGCTCCTGAATGTGCATCCATAAGCAAGGCAACTAGAGAGTCTGATGTATACAGTTTTGGAGTCGTTGCCTTGGAGCTAGCCTGTGGGAGAAGACCAATTGACCTCTCTGCCAATGAAGAACAAGTCATCATGGTGGAATGGGTATGGGAACTCTATGGCATGGGTATACTTTTTGAAGCAGCTGATCGACGACTTGATGGAGACTTTGATGATCAAGAAATGGGAAGGCTAATGGTTGTTGGCCTTTGGTGTGCTCACCCAGATTACACTTCGAGGCCGACAATTAGACACGCACTTAGTGTGCTTAATTGTGAAGCTCCGCTGCCCACTCTCCCACCAAAGATGCCCAAACCCACCTATGTTGCTCCTTCTTTTTCTGAAGTTAGTTCTTCAAGCTTTTTGTCCCCTAATGCTAGTTCTTCCGGTATCAATCAATCCCAGCCTTCAACCAGTAGCCCATACACTGGATCCTCACAATCAACCAAGTCACTCGCGCTTCTCCGAACAGGATAA 2067 0.4233 MTSSKQQVSSTMEVSQCRRKTRLLPCLAITKILLFLIIIPGAAQITFDYQQFLDGDYENLKLEGHVYQENGVLQLTRLEKDSVGRVTYDKLLQLWDTETRKLANFTSRFTFIINATNNTELGDGITFFLAHPNLSLPYPPDGSGIGLFSRLQDPNYPNKYPFVAVEFDTYPNDNDPPYDHVGIDVKNMWTQYTTRWYNIKDGRKYDAEISYNSSSYKLNVIFTGYKDNKTVQQHYSHEIDLRDFLPDKVQFGFSSATGYLWETHTLCSWSFNSSLEIGRNKGKSKTMLIVGLSIGACVVIGGLCLAWVVIRKMNCRTKKDGLDLSLDNEFERNMGPKKFSYNNLVRATNNFAEEQKLGEGGFGGVYKGFMRDLNTYVAVKKVSRGSRQGVKEYASEVKIISQLRHKNLVQLIGWCHKGNDLLLIYEFMSNGSLDYHLFRSRNLLSWPTRYIIAQGLASAILYLHEEWERCVVHRDIKSSNVMLDSNFNAKLGDFGLARLVEHGKASETTIVAGTKGYMAPECASISKATRESDVYSFGVVALELACGRRPIDLSANEEQVIMVEWVWELYGMGILFEAADRRLDGDFDDQEMGRLMVVGLWCAHPDYTSRPTIRHALSVLNCEAPLPTLPPKMPKPTYVAPSFSEVSSSSFLSPNASSSGINQSQPSTSSPYTGSSQSTKSLALLRTG 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1484 688 Gene3D - 43 289 - -
Bisa04g1484 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 277 IPR013320 -
Bisa04g1484 688 SUPERFAMILY Protein kinase-like (PK-like) 335 648 IPR011009 -
Bisa04g1484 688 SMART serkin_6 351 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1484 688 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
Bisa04g1484 688 CDD lectin_legume_LecRK_Arcelin_ConA 47 275 IPR001220 GO:0030246
Bisa04g1484 688 ProSiteProfiles Protein kinase domain profile. 351 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1484 688 PANTHER - 68 631 - -
Bisa04g1484 688 FunFam Lectin-domain containing receptor kinase A4.3 428 640 - -
Bisa04g1484 688 ProSitePatterns Legume lectins beta-chain signature. 163 169 IPR019825 -
Bisa04g1484 688 FunFam L-type lectin-domain containing receptor kinase IX.1 336 427 - -
Bisa04g1484 688 MobiDBLite consensus disorder prediction 647 688 - -
Bisa04g1484 688 Gene3D Transferase(Phosphotransferase) domain 1 428 641 - -
Bisa04g1484 688 Pfam Protein kinase domain 352 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1484 688 Pfam Legume lectin domain 45 285 IPR001220 GO:0030246
Bisa04g1484 688 ProSitePatterns Protein kinases ATP-binding region signature. 357 381 IPR017441 GO:0005524
Bisa04g1484 688 ProSitePatterns Legume lectins alpha-chain signature. 245 254 IPR000985 -
Bisa04g1484 688 CDD STKc_IRAK 357 621 - -
Bisa04g1484 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1484 Bisa-ChrBisa04 47165525 47169691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1484 32 638 Receptor kinase-like Gene Family AT5G10530 44.674 1.02e-170 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bisa04g1484 Pkinase 1.2e-49 CL0016