Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1430 ATGCCCATGATTTGGTTTCCTCTTCTTTTTCTCTGCTTTGTTGATTTATCGTTGTCTCAGTCAGATGAGTTTCAGTTTCAGACCCTTATGAAGTTCAAGTCCTCTGTTCGAACTTCAAATGGGGATGATGTTTTCGGTTCCTGGATGAAGTCTAATTCTCTCTGCAACTTCACTGGGATTATCTGCAATTCCAATGGCTCTGTCTCGGAAATCAGTCTCGCCCAAAAACAACTCGTGGGTACTATTCCTTTTGATTCCATTTGCGAGCTTCGGTCGCTCGAGAAGATTTCTCTGGGGTCGAACTTCTTTCATGGGAGCATCGGTGATGGCTTGAGGAAGTGCGGTAATTTGCAGTATTTGGATTTGAGTGGGAATTCGTTTTCTGGGGCTGTCCCTGATATTTCCAATTTGAACAAGCTCAAGTACTTGAAATTAAATGCCAGTGGAATTTCTGGGGAATTTCCATGGAAATCATTGGAAAATCTGACAAGTCTCACATTCTTAAGCCTTGGGGATAACTCATTTGAAAGAAGTCCTTTCCCTGAGGAGGTGTTAAAGCTGGACAAATTGTACTGGCTTTACCTCTCAAATTGCAGTCTCATAGGGAAAATCCCATTGGGTATTGGTAATCTGACTCAGCTTCAGAATCTTGAGCTTTCTGATAACCAATTGACCGGTGAGATTCCATCTGATATCGTGAAGCTTCAGAATCTGAGGCAACTCGAGCTATATGACAACTTCCTGGTCGGAAAAATCCCAATAGGTTTCAGCAACCTCACAAATCTTGTCAATCTTGATCTTTCTAATAATGAGCTTGAAGGTGATCTTTCTGAGCTGGGGTTCTTGACAAACTTAGCTTCTCTTCAGCTTTTTCAGAACCAGTTCTCTGGAGGAATTCCAATTGAGTTTGGAGATTTCAAAAAGCTCTCAGAATTTTCTCTTTATGCAAATAATCTCACTGGTCCTCTCCCTCAGAAGCTTGGTTCTTGGGTAGGCTTGCAATATATCGATGTTTCTGATAACTCTCTTTCGGGTCCTATTCCCCCTGACATGTGCAGGAACAACCAAATGACTGAGCTAGCTATCTTAAACAATAGCTTCACCGGAAGTATACCAGAAACATATGCCAATTGTTCATCCATGGGTCGTTTTCTTGTTAACAGAAACTCACTTTCGGGTCGTGTTCCTTCCGGTATATGGGGCTTGCCACACATGGAGATAATTGATCTTTCAATGAACCAGTTTGATGGTCCAATAGCATCTGACATTGCCAAAGCCAAATCTCTTGCACAAATGTTTTTATCTGAGAATCGGTTCTCAGGTGAGTTACCATTGGCTATGTCCGAAGCTTCTTCATTGGTTTCAATTAAGCTGAGTTCAAATCGATTTTCTGGTTACATCCCAGAAACAATTGGCAAGTTGAAGAAATTGGGTAGTCTTAAATTGAATGAAAACAATTTCTCTGGCTCCATACCGGAGTCATTAAGTTCATGTATTTCTCTTAGTGAAATAAACCTTGCTAGTAACTCACTTTCTGGGAAAATCCCTGAAACTCTTGGCTCTCTGCCTACTCTGAACTCATTGAACTTGTCGTCAAATAGACTTTCTGGTGAAATTCCATTGAGTTTTTCATCTCTGAGACTTAGCCTTCTTGATTTATCAAACAACCAGTTGTCTGGTCCCATACCGGATTCACTCTCGATTCCAGCATTCGCAGATGGGTTTAAGAGAAATCCTGGGTTATGCAGCCAGAAATTAGAAAATTTCAGGCCTTGTTCATTGGAAAACACTAGATCAAGTCGAATCCGAAATATTATACTAGGTTTCATAGCTGGTTTAATGGTTCTCCTAGTTTCATTTGTATGTTTACTGTTTGTTAAACTGAAGAAGAACAAATTAGAGAAGCCTTTGAAGACTGATTCCTGGAACTTAAAGAAGTACCACGTACTAAACTTCAATGAGAACGAAATCATTGAAGGGATCAAGTCTGAGAATCTGATAGGCAAAGGAGGGTCAGGGAATGTTTACAAGGTTGTGCTTAAATGTGGCAAGGAATTAGGAGTCAAACACATATGGACTTCAGGTCCGGGTGAACCAGGAAGTTGCCGGAGCAGCTCGGCAATGCTGAAAAGGAGGTCCCGGTCGCCAGAGTTCGCTGCTGAAGTGGCCACACTGAGCTCCATAAGGCATGTGAATGTGGTAAAGCTCTATTGTAGCATCACAAGCGAAGACAGCAGTCTTCTTGTTTACGAGTTCTTACCGAATGGGAGCTTGTGGGATAGGCTGCACAATTGCAAGAAAACTCAGATGGGGTGGGAGGTGAAGTATGAGATTGCAATGGGAGCTGCTAGGGGATTGGAGTATCTGCATCATGGGTGTGATAGACCGGTTATACACCGAGATGTGAAATCGAGTAACATTTTGCTTGATGAGGAATGGAAGCCGAGGATTGCTGACTTTGGGCTTGCCAAGGTTGTGCAGGGAGGAGCAGGCAATTGGACTCAGGTCATTGCTGGAACACTTGGATACATGCCTCCTGAGTATGCCTACACTTGTAAGGTCACGGAGAAAAGCGATGTGTACAGCTTCGGGGTAGTCCTAATGGAATTAGTCACAGGGAAGAAGCCGAACGAATCGGAGTTTGGAGAGAACAAGGACATTGTCCAATGGGTATGCAGCAAGATGAGGGACAAAGGAGATATGGCTGAATTGGTGGATTCCACAATTGAAAGGCATTTCAGAGAAGATGCCATGAAGGTTCTGAGAATTGCAACACTCTGTACAGTGAACATTCCATCTTCAAGACCTTCCATGAAAGTGGTGGTTCAAATGCTGGAAGAGGCAGAGCCCTGTACTTTGACCAGTGTTATTGTGAATAAAGATGGTTAA 2889 0.4264 MPMIWFPLLFLCFVDLSLSQSDEFQFQTLMKFKSSVRTSNGDDVFGSWMKSNSLCNFTGIICNSNGSVSEISLAQKQLVGTIPFDSICELRSLEKISLGSNFFHGSIGDGLRKCGNLQYLDLSGNSFSGAVPDISNLNKLKYLKLNASGISGEFPWKSLENLTSLTFLSLGDNSFERSPFPEEVLKLDKLYWLYLSNCSLIGKIPLGIGNLTQLQNLELSDNQLTGEIPSDIVKLQNLRQLELYDNFLVGKIPIGFSNLTNLVNLDLSNNELEGDLSELGFLTNLASLQLFQNQFSGGIPIEFGDFKKLSEFSLYANNLTGPLPQKLGSWVGLQYIDVSDNSLSGPIPPDMCRNNQMTELAILNNSFTGSIPETYANCSSMGRFLVNRNSLSGRVPSGIWGLPHMEIIDLSMNQFDGPIASDIAKAKSLAQMFLSENRFSGELPLAMSEASSLVSIKLSSNRFSGYIPETIGKLKKLGSLKLNENNFSGSIPESLSSCISLSEINLASNSLSGKIPETLGSLPTLNSLNLSSNRLSGEIPLSFSSLRLSLLDLSNNQLSGPIPDSLSIPAFADGFKRNPGLCSQKLENFRPCSLENTRSSRIRNIILGFIAGLMVLLVSFVCLLFVKLKKNKLEKPLKTDSWNLKKYHVLNFNENEIIEGIKSENLIGKGGSGNVYKVVLKCGKELGVKHIWTSGPGEPGSCRSSSAMLKRRSRSPEFAAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDRLHNCKKTQMGWEVKYEIAMGAARGLEYLHHGCDRPVIHRDVKSSNILLDEEWKPRIADFGLAKVVQGGAGNWTQVIAGTLGYMPPEYAYTCKVTEKSDVYSFGVVLMELVTGKKPNESEFGENKDIVQWVCSKMRDKGDMAELVDSTIERHFREDAMKVLRIATLCTVNIPSSRPSMKVVVQMLEEAEPCTLTSVIVNKDG 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1430 962 SMART LRR_typ_2 211 235 IPR003591 -
Bisa04g1430 962 SMART LRR_typ_2 114 137 IPR003591 -
Bisa04g1430 962 SMART LRR_typ_2 474 498 IPR003591 -
Bisa04g1430 962 SMART LRR_typ_2 522 545 IPR003591 -
Bisa04g1430 962 SMART LRR_typ_2 162 187 IPR003591 -
Bisa04g1430 962 SMART LRR_typ_2 259 283 IPR003591 -
Bisa04g1430 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672|GO:0006468
Bisa04g1430 962 SUPERFAMILY Protein kinase-like (PK-like) 652 946 IPR011009 -
Bisa04g1430 962 Gene3D Transferase(Phosphotransferase) domain 1 753 956 - -
Bisa04g1430 962 FunFam Leucine-rich receptor-like protein kinase family protein 183 278 - -
Bisa04g1430 962 FunFam Leucine-rich repeat receptor-like protein kinase TDR 279 594 - -
Bisa04g1430 962 ProSiteProfiles Leucine-rich repeat profile. 116 138 IPR001611 GO:0005515
Bisa04g1430 962 ProSiteProfiles Leucine-rich repeat profile. 261 283 IPR001611 GO:0005515
Bisa04g1430 962 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Bisa04g1430 962 FunFam Probable inactive receptor kinase RLK902 22 182 - -
Bisa04g1430 962 PRINTS Leucine-rich repeat signature 117 130 - -
Bisa04g1430 962 PRINTS Leucine-rich repeat signature 259 272 - -
Bisa04g1430 962 FunFam Receptor-like protein kinase HAIKU2 644 752 - -
Bisa04g1430 962 ProSiteProfiles Protein kinase domain profile. 661 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1430 962 SMART serkin_6 661 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1430 962 Gene3D Phosphorylase Kinase; domain 1 645 752 - -
Bisa04g1430 962 SUPERFAMILY L domain-like 53 380 - -
Bisa04g1430 962 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 753 961 - -
Bisa04g1430 962 CDD STKc_IRAK 667 947 - -
Bisa04g1430 962 Gene3D Ribonuclease Inhibitor 182 234 IPR032675 -
Bisa04g1430 962 Pfam Leucine rich repeat 452 511 IPR001611 GO:0005515
Bisa04g1430 962 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Bisa04g1430 962 PANTHER OS05G0588300 PROTEIN 302 424 - -
Bisa04g1430 962 SUPERFAMILY RNI-like 322 656 - -
Bisa04g1430 962 Gene3D Ribonuclease Inhibitor 235 311 IPR032675 -
Bisa04g1430 962 Gene3D Ribonuclease Inhibitor 312 593 IPR032675 -
Bisa04g1430 962 Pfam Protein kinase domain 663 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1430 Bisa-ChrBisa04 45580621 45584352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1430 10 961 Receptor kinase-like Gene Family AT1G09970 57.336 0.0 1051
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa04g1430 Pkinase 1.8e-41 CL0016