Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1429 ATGAGGGACGAAGAAGATATGGAAAAGCCATTAATGGGTTCTAGTTCTAGAAGTATTGATTATGTCAGGAGAAGAGTGAAGCCAAATGAAGCCATGACGACAAAAGTGCCTGTGAACAACAAGGGGGCATGGACACCAGAAGAAGATATGAAACTTGCAGAGACTATTGCACTTCATGGGGCAAAAAGGTGGTCTTTGATTGCAAAAAGACTACCGGGTCGAACGGACAATGAGATAAAGAACTACTGGAACTCTCATTTAAGCAAGAAAATGAAGGTTGGAGAGAGGCAAAGTGAGTATTCAAGAAGAGAGGAGAAACACGAGATGGTGATGAAGAAGAAGGAGGGGGAGGAGAATCAAGCAGACACAGAAATAATTAGGGAAGAGAATTCAAATGAAGGATGTGAGAAGTCATCAAAAGTCATTGTTGATGTGGATGGAGTCTTTGATTTCTGTGACGAAGGTCCATTGAATCTGGAGTGGGTTAGCAAATTCCTTGAATTGAACTAG 510 0.4157 MRDEEDMEKPLMGSSSRSIDYVRRRVKPNEAMTTKVPVNNKGAWTPEEDMKLAETIALHGAKRWSLIAKRLPGRTDNEIKNYWNSHLSKKMKVGERQSEYSRREEKHEMVMKKKEGEENQADTEIIREENSNEGCEKSSKVIVDVDGVFDFCDEGPLNLEWVSKFLELN 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1429 169 SMART sant 40 89 IPR001005 -
Bisa04g1429 169 Pfam Myb-like DNA-binding domain 41 87 IPR001005 -
Bisa04g1429 169 ProSiteProfiles Myb-like domain profile. 36 87 IPR001005 -
Bisa04g1429 169 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 91 IPR017930 -
Bisa04g1429 169 MobiDBLite consensus disorder prediction 94 131 - -
Bisa04g1429 169 SUPERFAMILY Homeodomain-like 39 97 IPR009057 -
Bisa04g1429 169 Gene3D - 43 121 - -
Bisa04g1429 169 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 63 128 - -
Bisa04g1429 169 CDD SANT 43 87 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1429 Bisa-ChrBisa04 45573607 45577162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1429 37 133 MYB Transcription Factor Family AT5G40330 39.175 4.15e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa04g1429 Myb_DNA-binding 6.9e-18 CL0123