Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1409 ATGCAGGTACTGGTGCTGCTCATGAATCTCGGGAATGGTCAGAACGAGTGCAGGGACATGTCTTGTGGCTTCAATAGTGATTTTGAAGGATTTATTGAAGTTCGATCTCCCTTCAAACTCGTGGACGGCAAGACTAACAATAATCGCTGTGGCTATCCCGGCTTTGCTCTATCCTGCACACATAACAATATCACAATGCTGGAGTTCCCAGCAAATCCAGCTCTTGCGAGAGTTAGACTCTCCGTCAACAGCATAGACTACGAATCCCGGCAATTACACGTGTCTGACCCTGATGATTGTCTTCCCAGACTCTTTCTGCAACTCCACAATTCCTCAATCTATCCTTTCCAATTCGATTCATTTTTCGATTATGCTAATACATCGACCAATGTTACTTTCTTCAATTGTTCTTCGGATGGATCGAGATACCTCACAAACAAGTACTCAGAACTCTCGTCTCGACAAGATAAGTTCGCATGTCCAATTTATGCTGCAGGCTCCGAAGAGAGCGTCGTTGAGTTGGGCTTAGTATCCTGCACCAAGATGTCGGAGTTGGTCTCCCCAGTACTCGCTATCGACCTTCGGGCAAACAGCATCACTCTGAAATGGTCCAAACCAAAATGTGATGTTCATAATTTTTATTGCAACCACAAACCAAGCAAGATACCTACCATTATTTTACCACCAACAGCAGGTTCAATTGTGTTGGCGTTGCTGCTTGTGGCGTTCTTTCATATATATCGTTATTTTAAACTGAAAGGAGATGATCAAGCCAGAGTAGAAAAATTTTTGGAAGATTACAGGGCACTCAGGCCTACTAGATTCTCTTATGCTGATATTAAGAGAATTACAAAGCAGTTCAAAGATAAATTAGGTGAAGGAGCTCACGGAGCAGTCTACAAAGGTAACCTATCTACCGAAATTCCAGTGGCTGTAAAGGTGCTCAATAACTCAGAAGGGGAAGGCCAAGAATTCATTAATGAAGTGGGGACCATGGGTAAAATCCATCACATTAATGTGGTTCGCTTGCTAGGCTTTTGTGCCGATGGCTGTCACCGCGCACTTGTTTATGATTTTTTTCCCAATGGTTCATTGGAGAAGTTCATATTTTCCCCTGGCAACAAGGACAACTTCCTCGGATGGCTAAAGCTGCAACAAATAGCTCTTGGCATAGCCAAAGGGATTGAATATCTTCATCAAGGATGTGAATATCGAATTCTTCACTTTGACATCAATCCTCATAATGTGTTATTGGATAACAATTTCATTCCTAAAATTTCTGATTTTGGTCTAGCTAAATTGTGTTCCAAAAATCAAAGTACAGTGTTAATGACTGCAGCTCGGGGAACCTTGGGCTATATTGCACCTGAAATGTTCTCTAGAAACTTTGGGAATGTATCATACAAATCAGATATTTATAGTTATGGAATGCTGCTGCTAGAAATGGTTGGGGGAAGGAATAATACAAGCACATCTCAAGAAACTGTCCAAGTTCTTTATCCAGAATGGATCCATAAATTGGTTGAAGGAGAAAATATAAGTATCCATATAGAAAATGAAAAAGACATTAGAATTGCAAAGAAACTAGCAATTGTGGGACTTTGGTGCATTCAATGGCATTCAGTGAACCGTCCATCTATGAAAATGGTGGTACAAATGCTAGAAGGAGATGGAGATAAATTGAAAGTTCCCCCTACTCCTTTTGACTCCACCATTTCTAGTAATACAAGTGCTGTCATTCCCCCAAGACGTATGAATTTGGAGTTAGAAGTTATCTGTGAAATGGATTAA 1791 0.4087 MQVLVLLMNLGNGQNECRDMSCGFNSDFEGFIEVRSPFKLVDGKTNNNRCGYPGFALSCTHNNITMLEFPANPALARVRLSVNSIDYESRQLHVSDPDDCLPRLFLQLHNSSIYPFQFDSFFDYANTSTNVTFFNCSSDGSRYLTNKYSELSSRQDKFACPIYAAGSEESVVELGLVSCTKMSELVSPVLAIDLRANSITLKWSKPKCDVHNFYCNHKPSKIPTIILPPTAGSIVLALLLVAFFHIYRYFKLKGDDQARVEKFLEDYRALRPTRFSYADIKRITKQFKDKLGEGAHGAVYKGNLSTEIPVAVKVLNNSEGEGQEFINEVGTMGKIHHINVVRLLGFCADGCHRALVYDFFPNGSLEKFIFSPGNKDNFLGWLKLQQIALGIAKGIEYLHQGCEYRILHFDINPHNVLLDNNFIPKISDFGLAKLCSKNQSTVLMTAARGTLGYIAPEMFSRNFGNVSYKSDIYSYGMLLLEMVGGRNNTSTSQETVQVLYPEWIHKLVEGENISIHIENEKDIRIAKKLAIVGLWCIQWHSVNRPSMKMVVQMLEGDGDKLKVPPTPFDSTISSNTSAVIPPRRMNLELEVICEMD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1409 596 Pfam Protein kinase domain 287 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1409 596 FunFam PR5-like receptor kinase 360 565 - -
Bisa04g1409 596 Gene3D Phosphorylase Kinase; domain 1 259 359 - -
Bisa04g1409 596 SUPERFAMILY Protein kinase-like (PK-like) 268 555 IPR011009 -
Bisa04g1409 596 ProSitePatterns Protein kinases ATP-binding region signature. 291 313 IPR017441 GO:0005524
Bisa04g1409 596 Gene3D Transferase(Phosphotransferase) domain 1 360 563 - -
Bisa04g1409 596 FunFam serine/threonine-protein kinase PBS1-like 254 359 - -
Bisa04g1409 596 Pfam Wall-associated receptor kinase galacturonan-binding 17 96 IPR025287 GO:0030247
Bisa04g1409 596 ProSiteProfiles Protein kinase domain profile. 285 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1409 596 PANTHER RUST RESISTANCE KINASE LR10-RELATED 257 573 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1409 Bisa-ChrBisa04 44751215 44753125 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1409 50 576 Receptor kinase-like Gene Family AT1G66910 36.717 3.91e-107 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bisa04g1409 Pkinase 6.3e-43 CL0016