Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1408 ATGCCGCGCATATTAGCAGAAGGATTACTCCAAATATTAGGGGAGGGGGCAAGCTATGACAATACCAATTACAATTTTAATCGGACACAACTTGCAATCGATTTAGGAGTAGTCACTGGAAGATTTGTTCTACCCTATATGGCAGTTCGCACTCTATTTGGGATCACATTTTTGCTTGCGCTATTGATTTATACCTGTCGAAGAAGACACTTATCAATTTATGAAAATATCGAAGATTTTCTGAAACTTCATAATCTCATTCCAATAAGGTACTCCTATAGGGAATTGAAGAAAATGACCAAAGGATTCAAGAACAAGCTAGGTGAAGGAGGCTTTGGCACTGTATACAAAGGGAAGCTAAGCAGCGGGATAGATGTTGCTGTCAAAACGTTGGGTAAATCTGAAGCTAATGGCCAAGAATTCATTAGTGAAGTCGCAACCATCGGAAGGATACATCATTTCAATGTGGTACGCCTTGTTGGGTTTTGTGTTGAGGGAAAACACCATGCCCTTGTTTATGAATTCATGCCTAATGGATCTCTTGATAAATATATCTTCTCCAAAGAAGGAAGTGTCCCATTAAGTTATGATAAAATATATGAAATATCATTGGGAGTGGCTCAAGGAATTGCTTATCTTCATCATGGCTGTGATATGCAAATATTGCATTTTGATATTAAGCCCCATAATATTCTTCTTGATGATAATTTCGTCCCAAAAATTTCAGATTTCGGACTTGCAAGATTATATCCTGTCGATGATAGTATTGTCACTTTGACTGCAGCTAGGGGAACAATAGGATATATGGCTCCGGAATTGTTCTATAAAAATATAGGTGGAGTGTCCTATAAGGCTGATGTTTATAGTTTTGGGATGCTTTTGATGGAAATGGCAAATAGGAGGAGGAACTTGAATTCTCAAGCAGAACATTCAAGCCAACTTTACTTTCCCTTGTGGATTTATGACCAATTCAATGAAGAGAAAGATATAGAAATGAAAGATTTAACAAAAGAAGAAAAGGAGTTAGCAAAGAAAATGTTTATAGTAGCACTATGGTGTATACAATTAAAGCCTTTTGATCGTCCCTCAATGAACAAAGTAGTAGAGATGTTAGAAGCAAGAGATGTTGAAAGCCTAGAAATGCCTCCAAAACCTTCTCTGTATCCTAATGAAACAGTTATACTGGATGATGGATCCAGTTTCAGCCAAACAACATCCATTGACTCCACATATTCTTCGAGGAGTCTAGGAGATATTGCTAATGCTGGGGAATAA 1275 0.3733 MPRILAEGLLQILGEGASYDNTNYNFNRTQLAIDLGVVTGRFVLPYMAVRTLFGITFLLALLIYTCRRRHLSIYENIEDFLKLHNLIPIRYSYRELKKMTKGFKNKLGEGGFGTVYKGKLSSGIDVAVKTLGKSEANGQEFISEVATIGRIHHFNVVRLVGFCVEGKHHALVYEFMPNGSLDKYIFSKEGSVPLSYDKIYEISLGVAQGIAYLHHGCDMQILHFDIKPHNILLDDNFVPKISDFGLARLYPVDDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMANRRRNLNSQAEHSSQLYFPLWIYDQFNEEKDIEMKDLTKEEKELAKKMFIVALWCIQLKPFDRPSMNKVVEMLEARDVESLEMPPKPSLYPNETVILDDGSSFSQTTSIDSTYSSRSLGDIANAGE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1408 424 SMART serkin_6 101 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1408 424 ProSiteProfiles Protein kinase domain profile. 101 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1408 424 Coils Coil 321 345 - -
Bisa04g1408 424 FunFam serine/threonine-protein kinase PBS1-like 72 175 - -
Bisa04g1408 424 Gene3D Phosphorylase Kinase; domain 1 77 175 - -
Bisa04g1408 424 CDD STKc_IRAK 107 372 - -
Bisa04g1408 424 Gene3D Transferase(Phosphotransferase) domain 1 176 381 - -
Bisa04g1408 424 ProSitePatterns Protein kinases ATP-binding region signature. 107 129 IPR017441 GO:0005524
Bisa04g1408 424 Pfam Protein kinase domain 104 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1408 424 PANTHER RUST RESISTANCE KINASE LR10-RELATED 74 393 IPR045874 GO:0004672
Bisa04g1408 424 SUPERFAMILY Protein kinase-like (PK-like) 86 373 IPR011009 -
Bisa04g1408 424 MobiDBLite consensus disorder prediction 399 417 - -
Bisa04g1408 424 MobiDBLite consensus disorder prediction 399 424 - -
Bisa04g1408 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Bisa04g1408 424 FunFam PR5-like receptor kinase 176 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1408 Bisa-ChrBisa04 44721374 44723568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1408 75 412 Receptor kinase-like Gene Family AT4G18250 48.991 5.51e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bisa04g1408 Pkinase 9.2e-49 CL0016