Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1403 ATGCAGGTAGCGGTGCTGCTCATGAATCTCGGGAATGGTCAGAACGAGTGCAGGAACATATATTGTGGCTCCAATAGCTATTTTGAAGGAGAAAATGGATTAAAGATAATGAATGTTATTGAAGTTCGATTTCCCTTCAAACTCGTGGACGGCAAGACTAACAATAATCGCTGTGGCTATCCCGGCTTTGCTCTGTCCTGTACACATAACAATGTCACAATGCTGGAGTTCCCAGCAAATCCAGCTCTTGCGAGAGTAAGACTCTCCGTCAACAGCATAGACTATGAATCCCAGCAACTATACGCATCAGACCCTGATGGTTGTCTTCCCAGACTCTTTCTGCAACTCCACAATTCCTCAATCGATCCCTTCCAATTCGATTCATCCCGCACATTTGATCAATATGCTAATACATCGACCAATGTTACTTTCTTCAATTGTTCTTCGGTTGGGTCGAGATACCTCACAAACAGACACTCAGAATACTCGTCTCCACAAGATATGTTCAAATGTCCAGTTTATGCTGCAGGCTCCGAAGAGAGCGTGGTTGAGTTGGGCTTAGTATCCTGCACCAAGATGTTGGAGTTGGTCTCCCCAGTACTCGCTGACTTCGAACTTCGCACAAACAGCATCACACTGAAATGGTCTAAACCAAAATGTGATGTTCATAATTTTTACTGCAACCACAAACCAAGCAAGATACCTACCATTATTTTACCACCAACAGGTTCAATTGTGTTGGCGTTGCTGTTTGTGGCATTCTTTCATATATATCGTTATTTTAAACTGAAAGGAGATGATCAAGCAAGAGTAGAAAAATTTTTGGAAGATTACAGGGCACTCAGACCTACTAGATTCTCTTATGCTGATATTAAGAGAATTACAAAGCAGTTCAAAGATAAATTAGGTGAAGGAGCTCACGGAGCAGTCTACAAAGGTAACCTATCTATCGAAATTCCAGTGGCTGTAAAGGTGCTCAGTAACTCAGAAGGGAAAGGCCAAGAATTCATTAATGAAGTGGGGACCATGGGTAAAATCCATCACATTAACGTGGTTCGCTTGCTAGGCTTTTGTGCCGATGGCTGTCACCGCGCACTTGTTTATGATTTTTTTCCCAATGGTTCACTCGAGAAGTTCATATTTTCCCCTGGCAACAAGGACAACTTCCTCGGATGGCTAAAGCTGCAACAAATAGCTCTTGGCATAGCCAAAGGGATTGAATATCTTCATCAAGGATGTGAATATCGAATTCTTCACTTTGACATCAATCCTCATAATGTGTTATTGGATAACAATTTCACTCCTAAAATTTCTGATTTTGGTCTAGCTAAATTGTGTTCCAAAAATCAAAGTACAGTGTTAATGACTGCAGCTCGGGGAACCTTGGGCTATATTGCACCTGAAATGTTTTCTAGAAACTTTGGGAATGTATCATACAAATCAGATATTTATAGTTATGGAATGCTGCTGCTAGAAATGGTTGGGGGAAGGAATAATACAAGCACATCTCAAGAAACTGTCCAAGTTCTTTATCCAGAATGGATCCATAACTTGGTTGAAGGAGAAGATATAAGTATCCATATAGAAAATGAAGAAGACATTAGAATTGCAAAGAAACTAGCAATTGTGGGACTTTGGTGCATTCAATGGCATCCAGTGAACCGTCCGTCTATGAAAACGGTGGTACAAATGCTAGAAGGAGATGGAGATAAATTGAAAGTGCCCCCTACTCCTTTTGACTCCACCATTTCTACTAATACAAGTGCTGTCATTCCCCCAAGACGTATGAATTTGGAGTTAGAAGTTATTCGTGAATTGGATTAA 1824 0.4084 MQVAVLLMNLGNGQNECRNIYCGSNSYFEGENGLKIMNVIEVRFPFKLVDGKTNNNRCGYPGFALSCTHNNVTMLEFPANPALARVRLSVNSIDYESQQLYASDPDGCLPRLFLQLHNSSIDPFQFDSSRTFDQYANTSTNVTFFNCSSVGSRYLTNRHSEYSSPQDMFKCPVYAAGSEESVVELGLVSCTKMLELVSPVLADFELRTNSITLKWSKPKCDVHNFYCNHKPSKIPTIILPPTGSIVLALLFVAFFHIYRYFKLKGDDQARVEKFLEDYRALRPTRFSYADIKRITKQFKDKLGEGAHGAVYKGNLSIEIPVAVKVLSNSEGKGQEFINEVGTMGKIHHINVVRLLGFCADGCHRALVYDFFPNGSLEKFIFSPGNKDNFLGWLKLQQIALGIAKGIEYLHQGCEYRILHFDINPHNVLLDNNFTPKISDFGLAKLCSKNQSTVLMTAARGTLGYIAPEMFSRNFGNVSYKSDIYSYGMLLLEMVGGRNNTSTSQETVQVLYPEWIHNLVEGEDISIHIENEEDIRIAKKLAIVGLWCIQWHPVNRPSMKTVVQMLEGDGDKLKVPPTPFDSTISTNTSAVIPPRRMNLELEVIRELD 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1403 607 ProSiteProfiles Protein kinase domain profile. 296 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1403 607 FunFam PR5-like receptor kinase 371 576 - -
Bisa04g1403 607 SUPERFAMILY Protein kinase-like (PK-like) 279 566 IPR011009 -
Bisa04g1403 607 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Bisa04g1403 607 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Bisa04g1403 607 Gene3D Transferase(Phosphotransferase) domain 1 371 574 - -
Bisa04g1403 607 Pfam Protein kinase domain 298 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1403 607 FunFam serine/threonine-protein kinase PBS1-like 265 370 - -
Bisa04g1403 607 PANTHER RUST RESISTANCE KINASE LR10-RELATED 268 584 IPR045874 GO:0004672
Bisa04g1403 607 Gene3D Phosphorylase Kinase; domain 1 270 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1403 Bisa-ChrBisa04 44647162 44649067 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1403 44 587 Receptor kinase-like Gene Family AT1G66910 37.190 4.02e-108 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bisa04g1403 Pkinase 1.1e-42 CL0016