Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1399 ATGGAGAGAGGGAAAGGCTTAAGGTTGTGGAGTGTAATGTTGTGGACTCTGCTTCTGCTTCAGCTTCATGGAGTGATGAGTTCAAAGAGGCAGAGCAAAGCCTGTGCCCCGTCTCGCACCATTAATGACATAGATCCCTATGGTCCCATTCCGAGAAAAGGATCAGAGTCAAGCGCTATAATGTCGCACGTCATATACTTGAACTGTAGCGATCCAGTGAGGGACGACGCAGCGTATGTGGATACGTCTCCTTGCCTCAATTACCACGCCAGAGGCCATTATTACGCTGTGCTTGGTGACTTGCTGGTGAGGGACTTAAAACCTCAGTGCCGTGTCATGTTCGTGGCTACCATCACATCCGCTTGGGCCTCCTTCCTGCACACCACCAACTTCACCTACGCTGCTATTCACAGAGTGCTTAGCTATGGATTTGAGGTTTCATGGTATAGACGAGCCTGTGTTGATTTTCCTTGTCCAATAGACAACCCCTGCAGATACGATGTTGACATTGAAGCTCTCCTTTGCGAACAATCCACACCTATCTGTTATACACCAATGGGAATAAATGACGATGCCGTTTGCCATTTTCTCTATGGTATTTACAAAGGATTACACCAAATATTAGGGGAGGGGACATACCATCACTATACCAGTTACGATTTTAGTCTGACACAACTTGCAATCGATTTAGGAGTAGGCACTGGAAGAGTTGTTCTACCCTATATTGCAGTTCGCACTCTATTTGGGATCACATTTTTACTTGCGCTATTGATTTATACCTATCGAAGAAGACACTTGTCAATTTATGAAGATATCGAAGATTTTCTGAAACTTCATAATCTCATTCCAATAAGGTACTCCTATAGGGAATTGAAGAAAATGACCGGAGGTTTCAAGAACAAGCTAGGTGAAGGAGGCTTTGGCACTGTATACAAAGGGAAGCTAAGCAGTGGGCCAGATGTTGCTATCAAAATGTTGGGTAAATCTAAAGCTAATGGCCAAGAATTCATTAGTGAAGTCGCAACCATTGGAAGGATACACCATTTCAATGTGGTACGCCTTGTTGGGTTCTGTGTTGAGGGAAAACATCGTGCTCTTGTCTATGAATTCATGCCTAATGGATCTCTAGATAAATATATATTCTCCAAAGAAGGAAGTGTCCCATTGAGTTATGATAAAATATACGAAATATCTTTGGGAGTGGCTCAAGGGATTGCTTATCTTCATCATGGCTGTGATATGCAAATATTGCATTTTGATATTAAGCCCCATAATATTCTTCTCGATGATAATTTTGTCCCAAAGATTTCAGATTTTGGACTTGCAAGATTATATCCTGTTGATGATAGTATTGTCACTTTGACTGCAGCTAGGGGAACAATAGGATACATGGCTCCGGAATTGTTCTATAAAAATATAGGTGGAGTGTCCTATAAGGCTGATGTCTATAGTTTCGGGATGCTTTTGATGGAAATGGCAAATAGGAGGAGGAACTTGAATTCTCAAGCAGAACATTCAAGTCAACTTTATTTTCCCTTGTGGATTTACGACCAATTCAATGAAGAGAAAGATATAGAAATGAAAGATTTAACAAAAGAAGAAAAGGAGTTAGCAAAGAAAATGTTTATAGTAGCGCTATGGTGTATACAATTGAAGCCTCTTGATCGTCCCTCAATGAACAAAGTAGTAGAGATGTTAGAAGCAGGAGATGCTAAAACCCTAGAAATGCCTCCAAAACCTTCTCTGTATCCTAATGAAACAGTTATACTGGATGATGGATCCAGTTTCAGCCAAACAACATCCATTGACTCCACATATTCTTCGAGTAGTCTAGGAGATATTGCTAATGCTGGGGAATAA 1860 0.4108 MERGKGLRLWSVMLWTLLLLQLHGVMSSKRQSKACAPSRTINDIDPYGPIPRKGSESSAIMSHVIYLNCSDPVRDDAAYVDTSPCLNYHARGHYYAVLGDLLVRDLKPQCRVMFVATITSAWASFLHTTNFTYAAIHRVLSYGFEVSWYRRACVDFPCPIDNPCRYDVDIEALLCEQSTPICYTPMGINDDAVCHFLYGIYKGLHQILGEGTYHHYTSYDFSLTQLAIDLGVGTGRVVLPYIAVRTLFGITFLLALLIYTYRRRHLSIYEDIEDFLKLHNLIPIRYSYRELKKMTGGFKNKLGEGGFGTVYKGKLSSGPDVAIKMLGKSKANGQEFISEVATIGRIHHFNVVRLVGFCVEGKHRALVYEFMPNGSLDKYIFSKEGSVPLSYDKIYEISLGVAQGIAYLHHGCDMQILHFDIKPHNILLDDNFVPKISDFGLARLYPVDDSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMANRRRNLNSQAEHSSQLYFPLWIYDQFNEEKDIEMKDLTKEEKELAKKMFIVALWCIQLKPLDRPSMNKVVEMLEAGDAKTLEMPPKPSLYPNETVILDDGSSFSQTTSIDSTYSSSSLGDIANAGE 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1399 619 FunFam serine/threonine-protein kinase PBS1-like 267 370 - -
Bisa04g1399 619 SUPERFAMILY Protein kinase-like (PK-like) 281 567 IPR011009 -
Bisa04g1399 619 Coils Coil 516 540 - -
Bisa04g1399 619 MobiDBLite consensus disorder prediction 599 619 - -
Bisa04g1399 619 Gene3D Transferase(Phosphotransferase) domain 1 371 576 - -
Bisa04g1399 619 ProSiteProfiles Protein kinase domain profile. 296 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1399 619 Pfam Protein kinase domain 299 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1399 619 SMART serkin_6 296 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1399 619 PANTHER RUST RESISTANCE KINASE LR10-RELATED 269 588 IPR045874 GO:0004672
Bisa04g1399 619 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Bisa04g1399 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Bisa04g1399 619 Gene3D Phosphorylase Kinase; domain 1 272 370 - -
Bisa04g1399 619 CDD STKc_IRAK 302 567 - -
Bisa04g1399 619 FunFam PR5-like receptor kinase 371 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1399 Bisa-ChrBisa04 44418920 44423334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1399 222 607 Receptor kinase-like Gene Family AT4G18250 45.823 2.74e-107 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bisa04g1399 Pkinase 1.8e-48 CL0016