Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1354 ATGATAAGCTCGACGCCGTGTTCTATGGCAGCCAATAACGATGCGGGAGGGATCGGCTACACCACCTGGCAAACTGATACGGTGGACCTCAAGCCCACAACGACAACAACGACGTCGTCTTGTGCTGATCACCAAGACTCTAATACTATTACTAACGATAGCTCTCTGGGTTTGCCTGTGATGGGTTTCGGCCTCTCCTCCAATTGGAATCATTCTTTGTTGGGTCGTTGTAGTGGAAAACCAGCGGAGAGCAACAATTTCAATACTTGTATGCTACAAGAGGGATCAGGAATTGATTCTTCATCTCCCAATTCAACAATCACCCAAAAAGATTGGAGACCTTTAAAGAGCTTCTCGTCAATCTCATCATCTTCTAGTTGTTCCACCATGAACGATGGTTTCAAGCAAGATTTATATGGCTACCCTTCTAATTCAACGTTGATTCAAAGTCTATATGACCTTCATCATCATAATCACATTCCTCAACCACAAGACTCACTTTTCACCAACCCATCTATGGCGTATTCAAGTACACCCAATTATGGGGTATCTTCCAACGAGGCAATATCACCAACTTCATGGTCCAAATTAGGGTTATTGCACTTCTCCAACAATAACAACACTACTCCTTTCTGGAATATTGCTTCGCCTCAGCCTGAGGCACTACATGACATGAGAGTAGGTGTTTTTGCCCCTTCTTCTTCATCATCGTCATCACAACCACAACAACAATACCAAACTTCCACACCCAATTTCCCAACTGCTCTCATAGCCAAGCCCAAGAGTGAAGAGGCTCTGGCGGAGCCGGCATCGACGGTGAAGAAAAGTGTTGGTGAACCTGCAATGAAGAAGCAAAGAATTGAGACCCCATCGCCATTACCAACTTTTAAGGTTCGGAAAGAGAAGCTGGGGGACCGAATCACTGCTCTTCAGCAGTTGGTTTCGCCTTTCGGAAAGACTGATACAGCATCTGTTCTTCATGAAGCAATCGAGTACATCAGGTTCCTTCATGATCAAGTTTTGAGCACCCCATACTTGAAAAATGGAGCTCCCATCCAGCACCATCAGCAGGGTTGTGAGATCGATGATTCCGAAGGGCCAAAGCAAGACTTAAGAAGCCGAGGGTTATGCTTAGTGCCCATCTCAAGCACATTCCCAGTGACTAACGAGACCACCGCTGATTTCTGGACGCCGTCGTTTGGAGGTGCACTTATCAGGTGA 1221 0.4595 MISSTPCSMAANNDAGGIGYTTWQTDTVDLKPTTTTTTSSCADHQDSNTITNDSSLGLPVMGFGLSSNWNHSLLGRCSGKPAESNNFNTCMLQEGSGIDSSSPNSTITQKDWRPLKSFSSISSSSSCSTMNDGFKQDLYGYPSNSTLIQSLYDLHHHNHIPQPQDSLFTNPSMAYSSTPNYGVSSNEAISPTSWSKLGLLHFSNNNNTTPFWNIASPQPEALHDMRVGVFAPSSSSSSSQPQQQYQTSTPNFPTALIAKPKSEEALAEPASTVKKSVGEPAMKKQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIRFLHDQVLSTPYLKNGAPIQHHQQGCEIDDSEGPKQDLRSRGLCLVPISSTFPVTNETTADFWTPSFGGALIR 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1354 406 CDD bHLH_AtbHLH_like 293 340 IPR045239 -
Bisa04g1354 406 FunFam Transcription factor bHLH123 family 297 357 - -
Bisa04g1354 406 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 287 336 IPR011598 GO:0046983
Bisa04g1354 406 Gene3D - 297 347 IPR036638 GO:0046983
Bisa04g1354 406 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 123 386 - -
Bisa04g1354 406 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 297 343 IPR036638 GO:0046983
Bisa04g1354 406 MobiDBLite consensus disorder prediction 262 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1354 Bisa-ChrBisa04 42426681 42429348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1354 49 406 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 40.771 8.25e-56 187