Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1342 ATGCTTGATGCACTGGTATATAGAATAATGTGGGACGCAAAACAACTCTTCGAAAATCATCATCGTTGTCGTTCATATGTTGGAGATATTTTCACTGTGTACCCTTTGGCTGTGGATGTTTTCGTTGAATTACCAGACACTGACGAGGTTGTGGCTGCGATTGAAGGGATTATATTGGAATCTATGCAACAAGTCAGGATGGTTCCAGCATCCACAGAAGCCATCCAGTCACTCAATATGTTGAAGCTTCAACAAAATGATTTTGCAGATATGAATCAAAATCAGTGCTGCATATGTCTCGAAGATTTTCATGAAGGCGTGAAGGTTTCAGCAATGCCATGCCAACATATTTATCACAATGATTGTATTGTTCAGTGGCTCAAAACTAGTCATTTTTGTCCCTTGTGTCGATACCCAATGCCCATTGACAACAATTCTTAG 441 0.3991 MLDALVYRIMWDAKQLFENHHRCRSYVGDIFTVYPLAVDVFVELPDTDEVVAAIEGIILESMQQVRMVPASTEAIQSLNMLKLQQNDFADMNQNQCCICLEDFHEGVKVSAMPCQHIYHNDCIVQWLKTSHFCPLCRYPMPIDNNS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1342 146 SUPERFAMILY RING/U-box 95 142 - -
Bisa04g1342 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 143 IPR013083 -
Bisa04g1342 146 SMART ring_2 96 136 IPR001841 -
Bisa04g1342 146 Pfam Ring finger domain 94 137 IPR001841 -
Bisa04g1342 146 CDD RING-H2_PA-TM-RING 95 137 - -
Bisa04g1342 146 ProSiteProfiles Zinc finger RING-type profile. 96 137 IPR001841 -
Bisa04g1342 146 PANTHER SI:CH211-59O9.10 63 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1342 Bisa-ChrBisa04 41882963 41883403 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1342 58 145 C3H Transcription Factor Family AT1G26800 36.364 3.79e-16 70.1