Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1313 ATGATGAATTCTGTGTATAATAATGGTATCAATATAGTATATGAGGAAGATGGAACTGTTTATTTGACTATGACTATAGCAGATGGATCGAACTTCAAAACATTCACTGTCGTCGTAAATTCAGAAGGCAAGTTATTGCAAAAACTATGGATTGATGCCAAGAAGCAATGGCAATGTGAGAGGATGAAAAATGGGAGGACAGATGGAAAAGAAGATGGGTTTTTGCATCTTCAGAAGGTTAAAGTGCCAGATTTTGCAGAATGGTCATCTGCTTCAGAGGACAAATGCAGAAGCCAGTGCTTGGAGAATTGCACTTGTGTAGCTTACTCATATGATTCTAACATCGGTTGTTTGTCTTGGTACGGAGGTCTGATTGACATACAACAGTATGCAAATGGAGGAAATGATCTGTATATTCGTGTAGCCTATTCAGATCTTGTGTACAAGGGGAAGCTGCAAGATGGCCAGGAAATAGCAGTTAAGAGGCTTTCTAAAGCATCTGGACAAGGGCTAGAGGAATTTATGAATGAGGTTTTAGTGATTTCTAAGCTTCAACACCGGAATCTTGTAAAACTCCTTGGATGCTGTATTGAAGGAGATGAAAAGATGTTGATCTATGAGTACATGCCAAACAAAAGTTTGGATGCATTTATTTTCAATGCACCAAAACATCAAATCCTAGATTGGAGAAAACGTTTTAACATAATTGAAGGAATAGCTCGAGGGATACTTTATCTTCACAGAGATTCTAGACTAAAAATTATACATAGAGACCTTAAGGCAAGTAATATCTTGCTAGATGAGAATCTAAATCCAAAAATTTCAGATTTTGGCATGGCCAAAATTGGAGGGAATGAAGATCAAGCTAATACAAGAAGAGTTGTTGGAACCTTTGGCTATATGTCTCCAGAATATGCAATAGAAGGACGCTTTTCTGAGAAATCAGATGTATTTAGCTTTGGAGTATTACTACTAGAGATCATTAGTGGAAGAAGAAACTCTAGCTTTTATAATGATGAGCATTCTCTCAGCCTTTTAGGATTTGCATGGAAATTATGGAATAAAGAGCGTATTGTATCATTAATAGATCCAGAAATGTCAGATCCTAACCTGGAGAAGGATATTTTGAGGTGCATACACATAGGACTTCTATGTGTGCAGAACCTTGCAAGAGAGAGACCTAGTATGAGCACTGTAATTTCTATGCTTAACAGTGAGATTGTCAATCTTCCTCCTCCAAGGCAACCTGCATTCATCCAGTGGCAGAGTACGTTGAGTTCAGAATCACATGAAGAATGTAATAGAATATTCTCCAATGGTAATATCAGCGTTACAGAAATACAAGGCAGATAG 1353 0.3747 MMNSVYNNGINIVYEEDGTVYLTMTIADGSNFKTFTVVVNSEGKLLQKLWIDAKKQWQCERMKNGRTDGKEDGFLHLQKVKVPDFAEWSSASEDKCRSQCLENCTCVAYSYDSNIGCLSWYGGLIDIQQYANGGNDLYIRVAYSDLVYKGKLQDGQEIAVKRLSKASGQGLEEFMNEVLVISKLQHRNLVKLLGCCIEGDEKMLIYEYMPNKSLDAFIFNAPKHQILDWRKRFNIIEGIARGILYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGMAKIGGNEDQANTRRVVGTFGYMSPEYAIEGRFSEKSDVFSFGVLLLEIISGRRNSSFYNDEHSLSLLGFAWKLWNKERIVSLIDPEMSDPNLEKDILRCIHIGLLCVQNLARERPSMSTVISMLNSEIVNLPPPRQPAFIQWQSTLSSESHEECNRIFSNGNISVTEIQGR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1313 450 CDD PAN_AP_plant 64 142 - -
Bisa04g1313 450 Pfam PAN-like domain 70 127 IPR003609 -
Bisa04g1313 450 SUPERFAMILY Protein kinase-like (PK-like) 147 430 IPR011009 -
Bisa04g1313 450 CDD STKc_IRAK 147 404 - -
Bisa04g1313 450 FunFam Uncharacterized protein 143 208 - -
Bisa04g1313 450 ProSiteProfiles Protein kinase domain profile. 124 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1313 450 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 147 426 - -
Bisa04g1313 450 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 209 411 - -
Bisa04g1313 450 Gene3D Phosphorylase Kinase; domain 1 131 208 - -
Bisa04g1313 450 SMART ntp_6 69 141 IPR003609 -
Bisa04g1313 450 ProSiteProfiles PAN/Apple domain profile. 59 142 IPR003609 -
Bisa04g1313 450 Pfam Protein tyrosine and serine/threonine kinase 147 403 IPR001245 GO:0004672|GO:0006468
Bisa04g1313 450 Gene3D Transferase(Phosphotransferase) domain 1 209 409 - -
Bisa04g1313 450 SMART serkin_6 143 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1313 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1313 Bisa-ChrBisa04 40820270 40822924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1313 147 418 Receptor kinase-like Gene Family AT4G11530 61.314 3.85e-117 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa04g1313 PK_Tyr_Ser-Thr 1.2e-44 CL0016