Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1309 ATGAAGAAGTGCGAGCTCTGCAATTCTCCCGCAAAGTTGTTCTGCGAATCAGATCAAGCCACTCTGTGTTGGGTCTGCGATGCAAAAGTCCACAGTGCTAATTTCCTCGTCACCAAGCACTCCAGGATCCTCCTCTGCCATCTCTGTCAATCTCTTACTCCCTGGCATGGCTCTGGACCCAAGTTCGTGCCCACCATGTCTGTTTGTAATGATTGTGTTAGCAACAATAGAGAAGGCTTCAAACAACACAGTGATGAAGATCATGATGATGATGGTGATGATGAGGATGAGGATGAGGATGAGGATGAGGATGGCAATAATGACGACGATGGTGGCGATGGTGGTGCAGAGGAAGAAGAAGGAGGAGATAATGATGATGAAGAAGAAGAAGAAGAAGAAAATCAAGTGGTGCCATGGAAATCTACGCCTCCTCCACCAGTTTCTAGTTCTTCCAATAGTTCGAATTTTTCTTCAAGGTTCTCAGATTAG 489 0.4581 MKKCELCNSPAKLFCESDQATLCWVCDAKVHSANFLVTKHSRILLCHLCQSLTPWHGSGPKFVPTMSVCNDCVSNNREGFKQHSDEDHDDDGDDEDEDEDEDEDGNNDDDGGDGGAEEEEGGDNDDEEEEEEENQVVPWKSTPPPPVSSSSNSSNFSSRFSD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1309 162 MobiDBLite consensus disorder prediction 77 162 - -
Bisa04g1309 162 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Bisa04g1309 162 SMART bboxneu5 1 45 IPR000315 GO:0008270
Bisa04g1309 162 Gene3D Classic Zinc Finger 1 34 - -
Bisa04g1309 162 CDD Bbox1_BBX-like 3 45 - -
Bisa04g1309 162 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Bisa04g1309 162 MobiDBLite consensus disorder prediction 146 162 - -
Bisa04g1309 162 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 158 - -
Bisa04g1309 162 MobiDBLite consensus disorder prediction 88 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1309 Bisa-ChrBisa04 40513883 40514371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1309 2 147 C2C2-CO-like Transcription Factor Family AT4G27310 43.293 2.51e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa04g1309 zf-B_box 1.8e-08 No_clan