Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1271 ATGGGTGAAGAAGAACCGTCCACCGGAGGCTCCACTCTCCGGCGAGCCATCGAAAATATCTCTTCCTTGATTTCTCTCTCCCATTCCATCAGGGTCTTCGCTGCAAAATGGCAATTAATTCGGAGCAAACTCGAGGAGCTTCATTCCGCTCTAATAGCCGCCGGAAACTGGGATGCCGGCGAGAACCCATCACACTCCAGCGTGGTTCCCGCCATACTGATGACCTCGAATGAGTGCCACGATCTCGCTCGACGCTGCGTCGATCTTTCTTACAGCGGAAAACTCCTGATGCAGAGCGATTTGGATGCGATGTTCGGCAAGCTTGATCGGCACGCGAGAAAGATATCGGAAATATGCAAAACTGGTATTCTGACTCATCGATACGCTCTTATCGTTTCAAGGCCCAATGTCGGAGCCTGCAAGGAGGACATGAGGTTTTACATTCGGGACTTGCTGACGCGAATGAAAATTGGGGATTTGAGTATGAAAAAGCAGGCTCTGATTAATCTCCACGAGGTTGTAATCGAAGATGAGAAGTGTGTTAAATTGATTGTGGAAGTGGGTGACATTGTTCATGTTCTGGTGAATTTCCTCGATTCTCCGGACATGGAAATTCAAGAGGAATCCACCAAATTGGTGTCTGTGATTGCCGGTTTCGGTTCCTATAAAGGGGTTCTGATCAGCGCCGGCGTAATCTCGCATTTGATTCGGGTTTTGGAATGTGGCAGCGAGGTCGGGAAAATAGGGTCCGCAAGGTGTTTGATGAAATTGACTGAGAATTCCGATAATGTTTGGTCTGTTTCAGCTCATGGAGGAGTCCCGGCTTTGCTAAGAATATGTTCTAATTCAGATTCCAAAGCAGAATTGGTTGGTCCTGCTTGTGGGGTACTGAGAAATCTTGTGGGTGTTGAAGAAATCAAGAGATTCATGCTTGAAGAGGGTGCGATTTCCACTTTCATTGGTCTCATGAAATCCAACGATGAAGCCATTCAGGTAAATTCCATAGAGTTCGTTCAAAACATTGCGTCTGGAGATGAAATAGTCAAGCAAATGGTCGTCAAAGAAGGTGGTATTCGTGCTTTGTTACATGTTTTAGATCCTAAACGGTCCTATTTCTCTAAGACAAGAGAAATAGCAATGAGAGCTGTGGAAAATCTCTGTTTTTCTTCGTCTAGTTCTGTTTCTAGTTTGATAAATTATGGGTTTGTGGATCAACTGCTATACTACATTCGCAATGGAGAGGTCTCAATTCAAGAACTGGCTCTGAAAGTGGGGATTAGGTTATGTAACACATCGGACGAAGCCAAGAGAGCAATGGGTGATGCTGGTTTTATGGCAGAGCTTGTGAAGTTTCTGAAGGCAAAGTCATTTGAAGTTCGTGAAATGGCCCTAGAAGCACTGTCTGGCATGGTCATGGTACATAGAAACAGAAAGAGGTTTGTGCAGAATGATCAAAACATAGCCCTTCTTCTGCAATCGCTTGATCCAGAAGAGGGAAACTCAGGTAATAAGAAGTTGTTCATTTCTATATTAATGTCGCTAACAAGTAGCAACAGTGGGAGAAGAAAGATTCAGAGTTCAAATTATGCCAAAAACATAGAGAAACTTGCAGAAGCTGAAGTTTCCTCCGATGCTAAGAGACTTGTGAGGAAGCTTTCCACAAACCGATTCCGCAGAATGTTGAGTGTACTCTGGCACTGA 1701 0.4468 MGEEEPSTGGSTLRRAIENISSLISLSHSIRVFAAKWQLIRSKLEELHSALIAAGNWDAGENPSHSSVVPAILMTSNECHDLARRCVDLSYSGKLLMQSDLDAMFGKLDRHARKISEICKTGILTHRYALIVSRPNVGACKEDMRFYIRDLLTRMKIGDLSMKKQALINLHEVVIEDEKCVKLIVEVGDIVHVLVNFLDSPDMEIQEESTKLVSVIAGFGSYKGVLISAGVISHLIRVLECGSEVGKIGSARCLMKLTENSDNVWSVSAHGGVPALLRICSNSDSKAELVGPACGVLRNLVGVEEIKRFMLEEGAISTFIGLMKSNDEAIQVNSIEFVQNIASGDEIVKQMVVKEGGIRALLHVLDPKRSYFSKTREIAMRAVENLCFSSSSSVSSLINYGFVDQLLYYIRNGEVSIQELALKVGIRLCNTSDEAKRAMGDAGFMAELVKFLKAKSFEVREMALEALSGMVMVHRNRKRFVQNDQNIALLLQSLDPEEGNSGNKKLFISILMSLTSSNSGRRKIQSSNYAKNIEKLAEAEVSSDAKRLVRKLSTNRFRRMLSVLWH 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1271 566 SMART arm_5 432 472 IPR000225 GO:0005515
Bisa04g1271 566 SMART arm_5 219 259 IPR000225 GO:0005515
Bisa04g1271 566 SMART arm_5 303 343 IPR000225 GO:0005515
Bisa04g1271 566 SMART arm_5 345 388 IPR000225 GO:0005515
Bisa04g1271 566 SMART arm_5 260 302 IPR000225 GO:0005515
Bisa04g1271 566 SMART arm_5 177 218 IPR000225 GO:0005515
Bisa04g1271 566 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 8 562 - -
Bisa04g1271 566 SUPERFAMILY ARM repeat 135 538 IPR016024 -
Bisa04g1271 566 Gene3D - 147 556 IPR011989 -
Bisa04g1271 566 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 271 315 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1271 Bisa-ChrBisa04 39308300 39310000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1271 148 413 U-box Gene Family AT3G46510 23.616 1.09e-07 52.8