Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1269 ATGCCTGTGCTCTTTCTCTCTCTGTTCATATTTCTTCCAACATTTTCTCGCGTTTTCTCTTTATTTTCCCGGAATTTTGGACACAGATCTTGTTGCGAGAAGCTAGGAGTAAGAATCACAAATCCAGAAGAAATGCGGGGCCTCAATTTTTTCGAGCGAGTATCCAGAGCTTTTCATGACCATTCTTCGCTTTTCAAATACGTAGTGGTCTGCACCGTAAGTGGTGGGGGACTTTTGGCTTATGCTGAGGCTGCTTCTTCTGAAGCAGTGAGTGACAAGAAAAAGGTGGTGGTGCTGGGAACTGGATGGGCAGCCACAAGTTTTTTGAAGAATCTAAATCACCCGAGATATGAGGTTCAGGTGGTATCGCCTCGTAATTATTTTGCATTCACTCCTTTGCTGCCTAGCGTTACGTGCGGCACAGTGGAAGCACGCAGCATTGTTGAGCCTGTTCGCAATTTTTTTAGGAAGAAAAAGATGGACATTCAATTCAGTGAAGCTGAATGTGTCAAGATAGATGCAGAAAACAGGAAAGTTTACTGCCGATCGAGTATAGAAAATAATTTGAATGAGAAAGAAGAATTTGTTGTGGACTATGACTACCTTATCATAGCTGTGGGAGCTAATGTCAACACATTCAATACTCCAGGAGTTGTGGAGAATTGCTATTTCTTGAAGGAAGTTGAAGATGCTCAAAAAATCCGAAGAACAGTTATAGATTGCTTTGAGAGAGCAAGTCTGCCAACAGTAAGTGAAGAAGAAAAAAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGCCCAACTGGAGTGGAGTTTGCAGCATCACTTCATGACTTTGTCAATGAGGATCTGGTTAAATTATATCCTGCGATAAAAGATTTTGTTAAAATTACTCTTCTTGAGGCAGGAGATCATATTCTAGGCATGTTTGACAAAAGAATCACTGCTTTTGCTGAAGAAAAGTTTCAAAGAGATGGTATAGATGTGAAAACAGGATCCATGGTTATTAAAGTATCTGAGAAAGAAATTTCTACTAAAGAAATGAAAAACGGAGCTGTTACTACAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGACCATTTATTAAAGATTTTATGAAGCAAGTTGGTCAGGCAAATAGACGTGCTCTGGCAACTGATGAATGGTTGAGAGTTGAGAGATGTGACAATGTGTATGCACTTGGAGATTGTGCTACAATAAACCAGCGAAAAGTCATGGAAGATATTGCTGCTATCTTTAAGAAGACAGACAAAGACAATTCAGGAACACTTACGGTCAAAGAGGTTCAAGAGGTCATTGATGACATCTGTGAAAGATACCCTCAAGTTGAGCTATATTTGAAGAACAAGCAGATGAGCAGCGTTGCTGATCTTTTGAAGGAAGCCAAGGGAGATGTTAAAAAAGAATCTATTGAACTTAATATTGAAGAACTCAAGACCGCACTTTCCAATGTGGATTCTCAAATGAAATTTCTTCCTGCTACAGCACAGGTTGCTTCTCAGCAAGGCACCTACCTGGCCAAGTGTTTCAACAGGATGGAAGAGTGCGAGAAAAATCCAGAAGGTCCCCTCAGGTTTAGGGGAGAAGGTCGTCATCGGTTCAAACCCTTTAGGTACAAGCATTTTGGTCAATTTGCTCCTCTTGGAGGAGAGCAGACAGCTGCACAGCTTCCTGGAGACTGGGTTTCAATAGGCCACAGCAGTCAATGGTTGTGGTACTCTGTCTATGCAAGCAAGCAAGTCAGCTGGCGCACAAGGGCCTTAGTGATATCAGACTGGACAAGACGTTTTATTTTTGGGAGGGACTCAAGTCAAATCTGA 1857 0.4152 MPVLFLSLFIFLPTFSRVFSLFSRNFGHRSCCEKLGVRITNPEEMRGLNFFERVSRAFHDHSSLFKYVVVCTVSGGGLLAYAEAASSEAVSDKKKVVVLGTGWAATSFLKNLNHPRYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNFFRKKKMDIQFSEAECVKIDAENRKVYCRSSIENNLNEKEEFVVDYDYLIIAVGANVNTFNTPGVVENCYFLKEVEDAQKIRRTVIDCFERASLPTVSEEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVKLYPAIKDFVKITLLEAGDHILGMFDKRITAFAEEKFQRDGIDVKTGSMVIKVSEKEISTKEMKNGAVTTIPYGMAVWSTGIGTRPFIKDFMKQVGQANRRALATDEWLRVERCDNVYALGDCATINQRKVMEDIAAIFKKTDKDNSGTLTVKEVQEVIDDICERYPQVELYLKNKQMSSVADLLKEAKGDVKKESIELNIEELKTALSNVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGRHRFKPFRYKHFGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVISDWTRRFIFGRDSSQI 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1269 618 ProSitePatterns EF-hand calcium-binding domain. 429 441 IPR018247 -
Bisa04g1269 618 ProSiteProfiles EF-hand calcium-binding domain profile. 416 451 IPR002048 GO:0005509
Bisa04g1269 618 SUPERFAMILY EF-hand 374 505 IPR011992 -
Bisa04g1269 618 PRINTS FAD-dependent pyridine nucleotide reductase signature 199 217 - -
Bisa04g1269 618 PRINTS FAD-dependent pyridine nucleotide reductase signature 68 87 - -
Bisa04g1269 618 PRINTS FAD-dependent pyridine nucleotide reductase signature 260 278 - -
Bisa04g1269 618 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 84 445 - -
Bisa04g1269 618 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 462 617 - -
Bisa04g1269 618 SUPERFAMILY FAD/NAD(P)-binding domain 93 312 IPR036188 -
Bisa04g1269 618 Gene3D - 461 617 - -
Bisa04g1269 618 Gene3D - 85 445 - -
Bisa04g1269 618 PANTHER NADH DEHYDROGENASE 85 618 IPR045024 GO:0003954|GO:0006116
Bisa04g1269 618 Coils Coil 480 500 - -
Bisa04g1269 618 Pfam Pyridine nucleotide-disulphide oxidoreductase 94 418 IPR023753 GO:0016491
Bisa04g1269 618 SUPERFAMILY FAD/NAD(P)-binding domain 254 413 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1269 Bisa-ChrBisa04 39135492 39140705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1269 45 618 Chloroplast and Mitochondria Gene Families AT4G21490 74.010 0.0 879