Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1250 ATGGGTCATACGAATATGGGTTTGCATGTGCCAATCTTTGTCATGTCGATGGTGATTTTTACAGGAACCTTTTGTACTGGAGATACTGACCTGCTTGATGTTGCAGCAATCAACAGTTTGTATGTTGCTCTGGGCTCACCACCTCTTCAAGGTTGGAAATCCACTGGAGGAGATCCATGCTTAGAACTTTGGCAAGGCGTGGATTGTGTCTACTCCAACATAACTGGATTGTCTCTTTCAGCTAATCAGTTAACTGGAAGTATTCCAGATACCCTATCCTCATTAACTCAATTGTCTGACTTGTCATTAAGCGATAACCATATAAGTGGAGAAATCCCAGATGCATTTCAGCAGGTTACTGGTTTGATGAACATAGATCTGTCAGGTAACAACTTTAGTGGTCAGCTACCCCCCTCAATTGGGAATTTGTCATTGCTTTTGACATTAAAAGATGGAAATCCATTTAATACTACTATCATTCCATCACCTCCAGCTGCAGCCCCAGCTCCTGTTGCTATGGCTCCATCCCCGGAAGAAGCACCGTGGAAAGTGGCATATAGTCCATCCATTGTGGAAGCACTAACACCTGCAAGTGCTAGGAAATCTTTCATAGCTAAGAACATTATTTGGATTGCCATTGCAGGGATGTTCATTTTTGTTGCATTAGGAGTTTGTCTTTTTATGTTGTGGTGCTTTAAGAGAAGGCCAGAGAATGGAGCTGCTAAGAAACATGATATGGGTGAATATACAACACCCTTACATAAACCTCAATACAGCAACTCTACTTTTGATATAACTAGTCACGAGGAGAAAGTTGGGAAACCAATACCGTCACTTGGATATGGAGTACAAAATAGAAGAACGAATATGATTCCAAAGGTTCAGGATGAACAAGAAAGAACTGTGAGCGGAGTATCTGCAGCTTCAACATGCAGGGGACCTCATGAAATAGTCAACACAGACCTGGTTTCCAAGCTTCCAACCATGCAGCCACTGCCACATCCTCTTCCTATCATTCCTAGTGAAAAGGTCTACACCGATTCAGCAATACCTACCAAAGCATTACAAGTTATGACAAATTCTGTACAAGTTTATACTATTGCTTCACTTCAGCAATATACAGATAGTTTTTCTCAAGAAAATTATCTTGGGGAAGGCACACTTGGCCCTGTTTATAGAGCCGAGCTCCCTGATGGAATGCTACTGGCAGTGAGGAAACTGAATGCTACTGCTTCCATGGGGCAAAACCATGAACAGTTTCTTCAATTAGTCTCCAATATCTCCAAAATGCAACATGATAATATTGTGAAGCTTATGGGCTACTGTGCTGAGCATGGTCAACGATTACTTGTATATGAGTATTGCAGTAATGGAACTCTTCATGATGCGCTGCATGAGGATACTGAACTTCATACCAAACTGTCATGGAATGCACGCATTCGGGTGGCTCTTGGAGCTGCAAGAGCTTTAGAGTATCTACACGAGAACTTTCAGCCACCTATTGTTCACAGAAATTTTAGGTCTGCTAATGTTCTCCTGAATGATGAGCTTGAAGTACGTGTCTCTGATTGTGGATTAAGTCCTTTACTATCTTCTGGATCTACTGGTCAGTTGTCAGGACGCCTGCTCACGGCACATGGTTATGGTGCTCCAGAATTTGAGTCAGGAAGTTATACACAGCAGAGTGACATCTTTAGTTTTGGAATTATAATGCTAGAACTCCTCACTGGACGAAAATCCTTTGACAGGTCACAGCCTCGTGGTGAGCAATTTCTGGTCAGATGGGCAGTTCCTCAACTCCATGACATCGATGCATTGGCAAAAATGGTTGACCCCTTCTTAAATGGGGCCTGTTCTATGAAGTCCTTATCACGTTTTGCAGACATCATTTCCTCCTGTGTACAGCGTGAACCAGAGTTCCGTCCGGCAATGGCTGAAATTGTCCAGGATCTCTTACGAATGATATAG 1968 0.4263 MGHTNMGLHVPIFVMSMVIFTGTFCTGDTDLLDVAAINSLYVALGSPPLQGWKSTGGDPCLELWQGVDCVYSNITGLSLSANQLTGSIPDTLSSLTQLSDLSLSDNHISGEIPDAFQQVTGLMNIDLSGNNFSGQLPPSIGNLSLLLTLKDGNPFNTTIIPSPPAAAPAPVAMAPSPEEAPWKVAYSPSIVEALTPASARKSFIAKNIIWIAIAGMFIFVALGVCLFMLWCFKRRPENGAAKKHDMGEYTTPLHKPQYSNSTFDITSHEEKVGKPIPSLGYGVQNRRTNMIPKVQDEQERTVSGVSAASTCRGPHEIVNTDLVSKLPTMQPLPHPLPIIPSEKVYTDSAIPTKALQVMTNSVQVYTIASLQQYTDSFSQENYLGEGTLGPVYRAELPDGMLLAVRKLNATASMGQNHEQFLQLVSNISKMQHDNIVKLMGYCAEHGQRLLVYEYCSNGTLHDALHEDTELHTKLSWNARIRVALGAARALEYLHENFQPPIVHRNFRSANVLLNDELEVRVSDCGLSPLLSSGSTGQLSGRLLTAHGYGAPEFESGSYTQQSDIFSFGIIMLELLTGRKSFDRSQPRGEQFLVRWAVPQLHDIDALAKMVDPFLNGACSMKSLSRFADIISSCVQREPEFRPAMAEIVQDLLRMI 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1250 655 FunFam Leucine-rich repeat receptor-like kinase 32 157 - -
Bisa04g1250 655 SUPERFAMILY Protein kinase-like (PK-like) 355 651 IPR011009 -
Bisa04g1250 655 Pfam Protein tyrosine and serine/threonine kinase 380 651 IPR001245 GO:0004672|GO:0006468
Bisa04g1250 655 ProSiteProfiles Protein kinase domain profile. 377 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1250 655 SUPERFAMILY L domain-like 35 161 - -
Bisa04g1250 655 Gene3D Phosphorylase Kinase; domain 1 341 454 - -
Bisa04g1250 655 Gene3D Ribonuclease Inhibitor 36 163 IPR032675 -
Bisa04g1250 655 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 455 655 - -
Bisa04g1250 655 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 157 IPR046959 -
Bisa04g1250 655 Gene3D Transferase(Phosphotransferase) domain 1 455 654 - -
Bisa04g1250 655 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 342 454 - -
Bisa04g1250 655 Pfam Leucine rich repeat 73 132 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1250 Bisa-ChrBisa04 38514068 38521793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1250 33 655 Strubbelig Receptor Gene Family AT4G03390 45.187 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Bisa04g1250 PK_Tyr_Ser-Thr 3.4e-42 CL0016