Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1241 ATGTCTTTTGAGCCATTAGATTGGTATTGTCGGCCAGTGGCAAATGGAGTATGGACAAAAGTGGTTGAGAATGCCTTTGGTGCTTATACTCCTTGTGCAGTTGATTCTCTTGTAGTCACTATTTCGAACTTCATACTTCTTGGCCTGTGCTTCTACCGAATATGGTTGATTAAGAAGGATTTCAGAGTCAAGAGATTCTGTTTACGGTCAAAGCTTTATAATTATATTTTGGGGTTGTTAGCTGGATGTTGCACTGCAGAGCCATTATTCAGATTAATCATGGGAGTATCAGTTTTAGATTTAGATGGGCAGATTGGTCTTGCTCCCTTTGAGATGGTTTCACTCATCGTTGAGGCTCTTGCTTGGTGCTCTATGCTGGTTTTGATTGGTGTTGAAACTAAAGTTTATATCCGTGAAGTCCGATGGTTTGTCAGATTTGGTGTGATTTATACTTTAGTAGGGGATGCTGTCATGTGCAATCTCATCTTTTCTGCGAAGGAGTTCTACAGTAGATCGGTGCTGTATTTATATATAAGCGAGGTTGCCTTTCAGGTTTTGTTTGGAATACTTCTGCTTGTGTATGTTCCTAATTTGGATCCTTATCCTGGTTATGCTCCCATCCGGAGTGAATTGGTCACTGATACAGCATATGATGAACTCTTAAGAGGAGAGCACATATGTCCTGAGAGGCATGCCAACGTATTTTCAAAAATAACTTTTGCTTGGATGAATCCTATCATGAAGCTAGGATATGAAAGACCTCTTACGGAGAAAGATGTATGGAAATTAGATACTTGGGATCAGACTGAGACATTGAACAACAAATTCCAAAGATGTTGGAATGAGGAATCTCGAAAATCCAAACCATGGCTTTTAAGAGCATTAAATAGTAGCCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGGAAGATTGGCAATGACGTTTCCCAATTTTTGGGGCCACTTATACTGAACCAGCTGCTACAGTCTATGCAAAGAGGTGATCCAGCGTGGATTGGCTACGTTTATGCCTTCTTAATATTTATTGGAGTGGTCTTCGGGGTGTTATGTGAAGCTCAGTATTTTCAGAATGTCATGCGTGTTGGTTACCGGCTTAGATCAACCCTGGTGGCAGCTGTATTTCGCAAAGCTTTAAGGCTTACTCATGAAGCCCGAAAGCAGTTTGCATCTGGGAAAATAACCAATTTAATGAGTACTGATGCTGAGTCACTTCAGCAAATATGCCAGTCACTTCATGCTTTGTGGTCAGCACCATTTCGTATCATTGTTGCATTGGTTCTTCTTTACCAACAACTGGGTGTTGCCTCCCTTCTTGGTGCTTTGATGCTGGTTCTTTTGTTCCCCGTACAGACTTTCATCATTAGTAGAATGCAGAAGTTGTCCAAGGAAGGGTTGCAGCGTACAGACAAGAGAATTGGTCTTATGAATGAAATTTTGGCTGCTATGGACACTGTGAAGTGTTATGCATGGGAGAGTAGTTTCCAATCTAAAGTACAAGGTGTTCGAAATGATGAATTATCTTGGTTTCGGAAAGCATCATTACTTGGAGCATGTAACGGATTTATACTAAACAGCATTCCAGTCTTTGTAACTGTTATTTCATTTGGAGTGTTCACCTTGCTTGGAGGGGATTTGACGCCTGCAAGAGCTTTTACATCTCTTTCTTTGTTCGCTGTGCTTCGCTTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGTGGTTAATGCAAATGTATCCTTAAAGCGTCTAGAGGAGTTGCTGTTAGCAGAAGAAAGGATTCTTATGCCTAATCCACCTCTAGAGCCAGGATTGCCAGCCATCAAAATCAAGCATGGATACTTTTCATGGGATTCAAAGGCAGGGAGGCCTTCATTGTCAAATATCAATCTGGATATACCTGTTGGTAGCCTAGTGGCAATTGTTGGCAGTACCGGAGAAGGGAAGACATCGCTCATATCTGCAATGCTTGGGGAGCTTCCACCGGTTGCAGATGTAACTGTTGTCATGAGAGGAACTGTTGCATATGTACCTCAAGTTTCATGGATTTTTAATGCAACCGTAAGGGATAACATTTTATTTGGTTCTCTCTATGACCCTTCGAGATATGAGAAGGCGATAGATGTGAGTGAACTGCAGCATGACCTTGAGTTATTGCCTGGTGGTGATCTTACTGAAATTGGTGAAAGAGGGGTCAACATCAGTGGTGGCCAAAAGCAAAGAGTATCCATTGCTAGAGCAGTCTACTCCAATTCAGATGTGTACATCTTTGATGACCCGCTGAGTGCTCTGGATGCACATGTTGCCAGAAAGGTTTTTGATAAATGCATCAAAGGAGAACTGAGAGGAAAGACCCGCGTTCTTGTTACAAATCAGCTTCATTTCCTTTCACAGGTTGATAGAATCATACTGGTCCATGAAGGTACGGTGAAAGAAGAAGGAACATTTGAGGAACTCTCTAACCATGGACTGCTGTTTCGAAAGCTTATGGAAAATGCAGGAAAGATGGAGGAGTATGCAGAAGAGAATGTAGACAGTGAAACCAATGATCAAAGCTCTTCAAAACCAGTTGCCAATGGAACACCTAATGATGTGGCAAGCATTGGAAATAAACCAAAAGAAGTCAAATCTGTTCTTATTAAGCAGGAAGAACGGGAGACTGGTGTTGTCAGTTGGAAAGTTCTACAGAGGTACAAGAATGCATTAGGAGGATTTTGGGTTGTACTAGTACTCTTTTCATGCTATATCTCGACAGAAGTCTTACGAGTTTCTAGTAGTACATGGCTGAGCCATTGGACTGATCAGAGTGCTTCAGAGGGTTATAATCCCGGTTACTACAATCTAATATATGCAGCTTTGTCATTTGGTCAGGTTTTGGTGACAATAACAAATTCTTTTTGGTTAATCGTATCAAGTCTTTATGCTGCCAGAAGGTTGCATGATGCCATGCTTCACTCTATTTTACGGGCTCCTATGGTTTTCTTCCATACCAGTCCACTTGGGAGGATTATCAATAGGTTTGCAAAGGATCTAGGTGATATAGACCGTAATGTTGCTCCATTTGTGAATATGTTTCTGGGCCAGGTTTCCCAGCTCCTTTCAACATTCATCCTGATAGGGATTGTCAGCACAATGTCCTTGTGGGCGATAATGCCATTATTGGTCTTATTTTATGGAGCCTATCTATATTATCAGAGCACAGCCCGAGAAGTGAAGCGCTTGGATTCTATTAGCAGATCTCCTGTATATGCACAATTTGGAGAAGCACTTAATGGTTTATCAACTATTCGTGCTTACAAAGCTTATGACCGAATGGCTGACGTAAATGGGAAATCTATGGACAACAATATACGCTTCACTCTTGTGAACATGAGTGGTAACCGGTGGCTTGCAATTCGTTTGGAAACCTTGGGAGGCCTTATGATATGGTTTACTGCATCCTTTGCTGTAATGCAGAATGGAAGGGCAGAGAACCAGCAGATTTTTGCATCCACTATGGGGCTATTACTTAGCTATGCTCTAAATATTACTAGTTTGCTGACTGGTGTGCTAAGGCTTGCAAGTCTGGCTGAGAATAGTTTAAACGCAGTTGAGCGTGTTGGCACTTATATTGATTTGCCTTCAGAGGCTCCATCTATCATTGAGAGTAATCGCCCTCCTCCTGGATGGCCCTCATCTGGATCAATCAGATTTGAAGATGTTGTTCTTCGATATAGGCCTGAACTTCCTCCTGTGTTACATGGGCTGTCTTTCACAGTTTTTCCCAGTGATAAGGTTGGCATTGTCGGTAGGACTGGAGCAGGAAAATCTAGCATGATTAATGCTTTATTTCGAATTGTAGAATTGGAAAGAGGAAAAATCTTAATTGATGACTATGATATTGCAAAGTTTGGATTGACTGATTTACGTAAAGTTCTTGGAATTATACCACAATCACCTGTTCTCTTTTCAGGAACTGTGAGATTTAATCTTGATCCTTTTAATGAACACAATGATGCTGACCTTTGGGAGGCTCTGGAGAGAGCATATTTGAAGGATGTGATACGGAGGAACTCTATGGGGCTGGATGCTGAGGTATCTGAGGCAGGTGAGAACTTCAGTGTTGGACAGAGACAACTATTAAGTCTCGCTCGAGCATTATTGCGGAGATCAAAGATATTGGTACTTGACGAGGCAACTGCAGCAGTTGATGTCAGAACTGATGCACTTATACAGAAAACAATTCGAGAAGAGTTTAAGTCCTGTACTATGCTAATTATCGCTCATCGACTTAACACCATTATTGACTGTGATCGAATCGTTCTGCTTGATGGTGGCCGGGTTCGTGAATATGATACCCCTGAGGAGCTACTGTCACATGAAGATAGTGCTTTCTCGAAGATGGTGCAGAGTACTGGAGCTGCAAATGCTCAATATTTACGCAGCTTAGTACTTGGTGGCGATGGGGATGGTGGAAACAAGGCACCTCAAGAGCGCAAGCATCTCGATGGCCAAAGAAAATGGTTAGCTTCTTCTCGCTGGGCTGCTGCAGCTCAGTTTGCCATTGCTGTCAACCTTACCTCATCCCAGAATGACCTTCAGAGATTGGAGATAGAAGACGACAACAGTATTCTCAAGAAGGCCAAGGATGCTGTGGTAACCTTGCAGGGGATACTGGATGGGAAGCATGATAAAGCAATTGAAGAATCTTTGGAGCGACACCAAGTGTCCCCCGACGGATGGTGGTCTGCCCTTTACAGAATGATGGAAGGTCTTGCTATGATGAGTAGATTGGCCCGGAACAGGCTTCATCAATCAGACTACACTTTTGACGACACTTCAATTAATTTTGACCATGTTGATATTTAG 4869 0.4221 MSFEPLDWYCRPVANGVWTKVVENAFGAYTPCAVDSLVVTISNFILLGLCFYRIWLIKKDFRVKRFCLRSKLYNYILGLLAGCCTAEPLFRLIMGVSVLDLDGQIGLAPFEMVSLIVEALAWCSMLVLIGVETKVYIREVRWFVRFGVIYTLVGDAVMCNLIFSAKEFYSRSVLYLYISEVAFQVLFGILLLVYVPNLDPYPGYAPIRSELVTDTAYDELLRGEHICPERHANVFSKITFAWMNPIMKLGYERPLTEKDVWKLDTWDQTETLNNKFQRCWNEESRKSKPWLLRALNSSLGGRFWWGGFWKIGNDVSQFLGPLILNQLLQSMQRGDPAWIGYVYAFLIFIGVVFGVLCEAQYFQNVMRVGYRLRSTLVAAVFRKALRLTHEARKQFASGKITNLMSTDAESLQQICQSLHALWSAPFRIIVALVLLYQQLGVASLLGALMLVLLFPVQTFIISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSKVQGVRNDELSWFRKASLLGACNGFILNSIPVFVTVISFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNIITQVVNANVSLKRLEELLLAEERILMPNPPLEPGLPAIKIKHGYFSWDSKAGRPSLSNINLDIPVGSLVAIVGSTGEGKTSLISAMLGELPPVADVTVVMRGTVAYVPQVSWIFNATVRDNILFGSLYDPSRYEKAIDVSELQHDLELLPGGDLTEIGERGVNISGGQKQRVSIARAVYSNSDVYIFDDPLSALDAHVARKVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILVHEGTVKEEGTFEELSNHGLLFRKLMENAGKMEEYAEENVDSETNDQSSSKPVANGTPNDVASIGNKPKEVKSVLIKQEERETGVVSWKVLQRYKNALGGFWVVLVLFSCYISTEVLRVSSSTWLSHWTDQSASEGYNPGYYNLIYAALSFGQVLVTITNSFWLIVSSLYAARRLHDAMLHSILRAPMVFFHTSPLGRIINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADVNGKSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTASFAVMQNGRAENQQIFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERVGTYIDLPSEAPSIIESNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLSFTVFPSDKVGIVGRTGAGKSSMINALFRIVELERGKILIDDYDIAKFGLTDLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAYLKDVIRRNSMGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRIVLLDGGRVREYDTPEELLSHEDSAFSKMVQSTGAANAQYLRSLVLGGDGDGGNKAPQERKHLDGQRKWLASSRWAAAAQFAIAVNLTSSQNDLQRLEIEDDNSILKKAKDAVVTLQGILDGKHDKAIEESLERHQVSPDGWWSALYRMMEGLAMMSRLARNRLHQSDYTFDDTSINFDHVDI 1622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1241 1622 SMART AAA_5 642 816 IPR003593 GO:0016887
Bisa04g1241 1622 SMART AAA_5 1262 1446 IPR003593 GO:0016887
Bisa04g1241 1622 Pfam ABC transporter transmembrane region 307 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa04g1241 1622 Pfam ABC transporter transmembrane region 916 1173 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa04g1241 1622 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa04g1241 1622 Gene3D ABC transporter type 1, transmembrane domain 273 601 IPR036640 GO:0005524|GO:0016020
Bisa04g1241 1622 Gene3D ABC transporter type 1, transmembrane domain 878 1217 IPR036640 GO:0005524|GO:0016020
Bisa04g1241 1622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1469 IPR027417 -
Bisa04g1241 1622 CDD ABCC_MRP_domain1 615 816 - -
Bisa04g1241 1622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Bisa04g1241 1622 Pfam ABC transporter 1253 1401 IPR003439 GO:0005524
Bisa04g1241 1622 MobiDBLite consensus disorder prediction 846 876 - -
Bisa04g1241 1622 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1476 - -
Bisa04g1241 1622 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 916 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa04g1241 1622 Gene3D - 610 865 IPR027417 -
Bisa04g1241 1622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1236 1470 IPR003439 GO:0005524
Bisa04g1241 1622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 838 IPR027417 -
Bisa04g1241 1622 CDD ABCC_MRP_domain2 1234 1454 - -
Bisa04g1241 1622 CDD ABC_6TM_ABCC_D1 305 590 IPR044746 GO:0140359
Bisa04g1241 1622 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Bisa04g1241 1622 Gene3D - 1219 1472 IPR027417 -
Bisa04g1241 1622 FunFam Multidrug resistance-associated protein member 4 1220 1472 - -
Bisa04g1241 1622 FunFam ABC transporter C family member 2 279 600 - -
Bisa04g1241 1622 SUPERFAMILY ABC transporter transmembrane region 912 1216 IPR036640 GO:0005524|GO:0016020
Bisa04g1241 1622 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Bisa04g1241 1622 ProSitePatterns ABC transporters family signature. 1373 1387 IPR017871 GO:0005524|GO:0016887
Bisa04g1241 1622 MobiDBLite consensus disorder prediction 853 873 - -
Bisa04g1241 1622 CDD ABC_6TM_ABCC_D2 915 1211 IPR044726 GO:0140359
Bisa04g1241 1622 SUPERFAMILY ABC transporter transmembrane region 289 595 IPR036640 GO:0005524|GO:0016020
Bisa04g1241 1622 FunFam ABC transporter C family member 2 609 855 - -
Bisa04g1241 1622 FunFam ABC transporter C family member 2 879 1217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1241 Bisa-ChrBisa04 38014655 38075038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1241 595 829 Calmodulin-binding Proteins AT2G36910 28.740 8.54e-24 107