Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1229 ATGGAACCAAGCAGGGCGGAGGGAAAGAGGAGCTTGGGGTACAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGATGTAGAGGAAGAAGATGAAGAGGTTGTGAGTGAGGTTGGTTCTGGTTGTGGAGCAGAAGAACATAACAGAAGGAAGAGGGTTATGAGAGATGTATACAGAAAGAGAGGGTGCAGAACAGGAACAGGAACAGGAACAGGAACAGGAGGCTCCTCAATGCCACCTTCTTGTCAGGTGAATGGTTGCGAGGCTGATCTCTCTGGCGCGAAGCAGTATCACCGGCGCCACAAGGTTTGCGAATACCATGCCAAGGACCCTTCCGTACTCATTGCAGGCCTGCAGCAACGCTTCTGTCAGCAATGCAGCAGGTTTCATGAGCTATCAGAGTTTGACGACGCAAAAAGAAGTTGTAGAAGGCGCTTGGCCGGACATAATGAGAGGCGTCGGAAGATTGCATCTGATTAA 504 0.5179 MEPSRAEGKRSLGYKKEEEEEEEEEEEEEEEEEDVEEEDEEVVSEVGSGCGAEEHNRRKRVMRDVYRKRGCRTGTGTGTGTGGSSMPPSCQVNGCEADLSGAKQYHRRHKVCEYHAKDPSVLIAGLQQRFCQQCSRFHELSEFDDAKRSCRRRLAGHNERRRKIASD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1229 167 ProSiteProfiles Zinc finger SBP-type profile. 87 164 IPR004333 GO:0003677
Bisa04g1229 167 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 59 163 IPR044817 GO:0003677
Bisa04g1229 167 MobiDBLite consensus disorder prediction 1 17 - -
Bisa04g1229 167 MobiDBLite consensus disorder prediction 70 89 - -
Bisa04g1229 167 MobiDBLite consensus disorder prediction 18 44 - -
Bisa04g1229 167 MobiDBLite consensus disorder prediction 1 58 - -
Bisa04g1229 167 SUPERFAMILY SBT domain 88 165 IPR036893 GO:0003677|GO:0005634
Bisa04g1229 167 Gene3D - 80 151 IPR036893 GO:0003677|GO:0005634
Bisa04g1229 167 Coils Coil 9 45 - -
Bisa04g1229 167 FunFam Squamosa promoter-binding-like protein 14 81 151 - -
Bisa04g1229 167 MobiDBLite consensus disorder prediction 74 89 - -
Bisa04g1229 167 Pfam SBP domain 90 163 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1229 Bisa-ChrBisa04 37423886 37425932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1229 76 167 SBP-box Gene Family AT2G33810 68.478 6.11e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa04g1229 SBP 3.7e-34 No_clan