Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1221 ATGGCCAAGGCTCAATCGTTTGGGAGGCTACGCTATAAAGAAGTTTTGGAAGCACATAAAACGACGTCGTTCCTGATTCCTACAAACTTCCACTCCCGTTTCCAAGCACACCAGGTGCAGTCGGAGTGCCAGAGTAACTGCGCGAAGAGAATGGAAAATGAAGTAACGAATAGAGACGACGACGATGAAGGTCCGCCTCCAGGCTGGCAGACCATCCACCATCCATCTCGCCCTCCTCCGCCGCCACGCCCTTCCGAAATGGCTCAAATGGTTTGTGGTTCTTGTCGTCGCCTGCTTTCCTATCCAAGAGCTGCCAAAAATGTTAAATGTTCATGCTGTCAGACAGTGAACCTTGTATTAGAAGCTCAACAGGTTGGCCAAGTTAAGTGTGGGAGCTGTGGAGTCCTGCTAATGTACCCATATGATGCTCCACAAGTTAGGTGTTCCTCCTGCCGGTTTGTGACAGAAATTGGGGAACACAACCGGCGGCCTCCATGGTCTGAACTACAACAGCAAGGAAAACCTTCTCCTCGCAAAACTGTTTAG 546 0.5018 MAKAQSFGRLRYKEVLEAHKTTSFLIPTNFHSRFQAHQVQSECQSNCAKRMENEVTNRDDDDEGPPPGWQTIHHPSRPPPPPRPSEMAQMVCGSCRRLLSYPRAAKNVKCSCCQTVNLVLEAQQVGQVKCGSCGVLLMYPYDAPQVRCSSCRFVTEIGEHNRRPPWSELQQQGKPSPRKTV 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1221 181 MobiDBLite consensus disorder prediction 53 87 - -
Bisa04g1221 181 PANTHER PROTEIN LSD1 38 173 IPR040319 -
Bisa04g1221 181 MobiDBLite consensus disorder prediction 71 86 - -
Bisa04g1221 181 NCBIfam zinc finger domain, LSD1 subclass 89 119 IPR005735 -
Bisa04g1221 181 NCBIfam zinc finger domain, LSD1 subclass 127 155 IPR005735 -
Bisa04g1221 181 MobiDBLite consensus disorder prediction 53 67 - -
Bisa04g1221 181 Pfam LSD1 zinc finger 92 116 IPR005735 -
Bisa04g1221 181 Pfam LSD1 zinc finger 130 154 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Bisa04g1221 zf-LSD1 6.8e-10 No_clan