Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1185 ATGGAAGGCAAACAAGAACTGGAAGGAGAAGAGTGGTTTCAGGCTCAAGCTCATCTGTTCAAACATATATTCAGTTTTGTAGGGTCTATGTGCCTTAAAAGTGCCCTTCAATTGGGCATACCCGACACAATCTACAACCATGGCCAACCCATTACTCTACCTGAGTTGCTCTCAGCACTTGAAGTTGACCCTTCAAAGTCTAATCATTTACATAGGATCATGCGCATACTAGTTCATTCTGGCCTCTTTTCTTCTACCATTGGCGTCGGACATGAAAAGGAAAAAGAGGGATACGATCTCACACCATCCTCTAGGCTTCTCCTCAAAGACAAACTTCCTTCCATGTTTGCTTATGCTCAATCAGTGTTTCATCCAGCAGTAATGAACCCACCTCAATTCTTGGGAGATTGGATTTACAGTGATGGAAATACAAATTCCCCTTTTCACAGTGCCTTTGGGATGGAGTTTTGGAGCTATGGAAGACAAAACGCAGAGTTTAGCAGAGTATTCAATGAAGGTATGGTTAGTGACTCCGATATGGTGAACTCGGCCATGAAAAACTGCAAATCAGTGTTCCGGGGATTGAACTCTTTGGTTGATGTTGGAGGTGGAAAAGGAGCTTTAGCTATGATCATCTCTGAGGAATTTCCTGATTTGAAGTGCACAGTGCTTGATCTTCCTCATGTTGTTGCCGATATGACAGATAGTGGCAATATCAAATTTGTAGGAGGTGACATGTTTGAGTTTATTCCTTCAGCAGATGCCATTCTTCTTAAGGTGGTTTTGCACACTTTAAGTGATGAAGACTGTAAGAAGGTATTGAAGAAGTGCAGAGAAGCTATTTCAAGCAAAGGCAAGGAGGGAAAAGTAATCATCATAGACATAGTAATAAATGAAGAGAAGGATAAGCATGAATTCACAGAAGCAAAGCTTTATTTCGATGTGATGATGATGTCTTTGGTGAATGGAAAAGAGAGAGATGAAAAAGAATGGGAGAAGCTGTTCATAGAAGCTGGATTTTGTCACTACAAGATAACACCCATATTTGGTTTAAGGTCTCTCATTGAAGTTTATCCTCAATTTTAA 1086 0.4052 MEGKQELEGEEWFQAQAHLFKHIFSFVGSMCLKSALQLGIPDTIYNHGQPITLPELLSALEVDPSKSNHLHRIMRILVHSGLFSSTIGVGHEKEKEGYDLTPSSRLLLKDKLPSMFAYAQSVFHPAVMNPPQFLGDWIYSDGNTNSPFHSAFGMEFWSYGRQNAEFSRVFNEGMVSDSDMVNSAMKNCKSVFRGLNSLVDVGGGKGALAMIISEEFPDLKCTVLDLPHVVADMTDSGNIKFVGGDMFEFIPSADAILLKVVLHTLSDEDCKKVLKKCREAISSKGKEGKVIIIDIVINEEKDKHEFTEAKLYFDVMMMSLVNGKERDEKEWEKLFIEAGFCHYKITPIFGLRSLIEVYPQF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1185 361 Gene3D Vaccinia Virus protein VP39 109 359 IPR029063 -
Bisa04g1185 361 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Bisa04g1185 361 Pfam O-methyltransferase domain 134 340 IPR001077 GO:0008171
Bisa04g1185 361 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Bisa04g1185 361 CDD AdoMet_MTases 198 297 - -
Bisa04g1185 361 FunFam Coniferyl alcohol 9-O-methyltransferase 2 107 - -
Bisa04g1185 361 FunFam O-methyltransferase ZRP4 109 359 - -
Bisa04g1185 361 Gene3D - 2 107 IPR036388 -
Bisa04g1185 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 110 IPR036390 -
Bisa04g1185 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 358 IPR029063 -
Bisa04g1185 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 359 IPR016461 GO:0008168
Bisa04g1185 361 PANTHER O-METHYLTRANSFERASE 12 344 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1185 Bisa-ChrBisa04 33896889 33899250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1185 30 361 Monolignol Biosynthesis Gene Families AT5G54160 34.211 3.83e-47 162