LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa04g1178	ATGAAGAAGGTTTACAAAACCAGCTGCAAGTCAGCATCACACAAGTTGTTAAAGGACAAGGCAAAGAACCGGGTTGATGACATGCAATTGATGTTCATGGATCTGCAGTTTGCCAGGAAGGAGAGCCGGACAGTTGATGCTGCAGTCCTTGAGGAGCAGGTCCATCAGATGCTTCGTGAGTGGAAGGCTGAGCTGAATGAACCCTCTCCTGCTTCTTCTTTACAGCAAGGTGGCAGCCTTGGTTCATTCTCGACCGATATCTGCCGGTTATTACAGCTGTGTGAGGAAGAAGATGATGCCACTAGTCCATTAGCTGCACCTAAGTCTGAACCTAATGATCCGGGTCTACAGGATGGGATTGATATGATTTTCCAAGAGGGTCAACAGCAACATGATTTCCCATTGGTTGATGAGACCAAACACTCCACCTCCACCTCAGGGGTTCGGAATGTAGCAGCTAGTGATATGGATGGGGCTGCTCTAGAATATAATCCATTTGATTTGCAGCAGGACTTTTATCGCAGCTTCTATGCTGGTTTTAATGGTACAGCATTTTGTGAGGAGGATGCCATTCCTCATGTATCTGATTATCTACCAAGTATCTGCCCTCCTCCTTCTGCATTCTTGGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGCTCAAGGTTTGGACTGGTATCAAGACTATTGCAGTAGCTTTCATGCTGCTTTGGCATTGAATGAAGGGCCACCAGGCATGGCTCCAGTTCTTCGACCTGGGGGCATCGGCTTGAAAGATAATTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAGGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCCAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAGAGGTCACTGCCAGATTATAGTGGACGAGGTTGGCATGAATCTAGGAAGCAATTGATGAATGAATTTGGAGGGCTGAAGCGATCTTATTATATGGACCCACAACCACTGAACCATTTTGAGTGGCATCTTTATGAATATGAGATCAGCAAGTGTGATGCATGTGCCTTGTACCGGTTGGAATTGAAGCTTGTTGATGGGAAAAAAAGCTCCAAGGGAAAGGTAACTAATGATTCTGTTACTGATCTTCAGAAGCAGATGGGGAGGCTCTCGGCGGAGTTTCCTCCCGATAGAAAAGGGTCTACCAAAGGCAGAGCCAAACTTAATGCCAAGGTCAGCATTGGCAGTGTCTATTCAGCTTCAAACAGAGTGAATCCATTAAACGGAACATATGAGTTTGGGTTGGCTGCACCATATGACTATCTTGTTGAGGATGTTGGCGACTACTATGTGACATGA	1440	0.4618	MKKVYKTSCKSASHKLLKDKAKNRVDDMQLMFMDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSPLAAPKSEPNDPGLQDGIDMIFQEGQQQHDFPLVDETKHSTSTSGVRNVAASDMDGAALEYNPFDLQQDFYRSFYAGFNGTAFCEEDAIPHVSDYLPSICPPPSAFLGPKCALWDCPRPAQGLDWYQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQLMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKSSKGKVTNDSVTDLQKQMGRLSAEFPPDRKGSTKGRAKLNAKVSIGSVYSASNRVNPLNGTYEFGLAAPYDYLVEDVGDYYVT	479

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa04g1178	479	PANTHER	TRANSCRIPTION FACTOR VOZ1	1	474	IPR039277	GO:0006355\|GO:0048578
	Bisa04g1178	479	MobiDBLite	consensus disorder prediction	99	119	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa04g1178	Bisa-ChrBisa04	33581650	33590335	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa04g1178	3	478	VOZ-9 Transcription Factor Family	AT1G28520	68.826	0.0	687

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Bisa04g1178		None	None	None