Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1174 ATGGACCAACAAAATAAAGCGTTTCTTCCTCTTCTTCTTTTGTTCCAATTAGTTCTGCTTGGAGCGGCACTGAACTCCAATGAAGACTTTATTGCTTTAAAATCTCTTTCTGAATTTTTGGAGAACACACCAGCCAGTTGGGCGGGACGGGACCCCTGTGCCGACCGTTGGGAAGGAATTAAATGCACCAATTCAAGAGTGACATCCATGACATTACAAAGCATGAACATAGGGGGCAGATTGTCTGATGATATCCTGTCATTATCGGAATTACAGACTCTGGATCTCTCTTACAACAAAGATTTGACTGGACCAATTCCAGATGAAATTGGGAATTTGACAAACCTGCAAACCCTAATACTTGTTGGTTGTAGTTTCTCTGGTCCTATTCCTGATTCAATAGGATCTCTTAAGCAGCTGACCTTTCTAGCTCTGAATTTGAATCAGTTCACCGGCAAGGTCCCACGTACCCTTGGCAGTTTATCCAAAATTGATTGGCTTGACATTGCTGATAACCAGATTGAAGGATCCATCCCTGTCTCTGATGATGAAGGACCTGGTCTTGACATGCTCCTCACAGCACAGCATTTTCATTTTGGGAATAACAAGCTCTCCGGCGAAATTCCAGCTCAGCTCTTCAGCTCAAATATGAAACTGAAACACTTGCTTCTTCACAACAATCAACTAAACGGCAGCATTCCTGACACCGTTGGACTAGTGAAGACACTGGACTTGATACGCTTGGACAGGAATCAGCTAAGCGGGGAAGTGCCATCAAACATCAGCAATCTCACAGAACTCAGTAAGCTGTACTTATCCAACAACAAGCTAACTGGCCCTATGCCTGACCTTACCCCATTGAGTGGCCTCCACTATGTGGAGTTGAGCAACAATACTTTCGATTCTGCTGGTATTCCTTCTTGGGCTTCAAATTTGCCATTTTTGACTACATTACAGTTAGAAAAGACAGGACTTCAAGGGGAAGTACCTGTCTCCTTATTTAACCAGCCTAATCTAGAGACTGTGGAAATGAGGAACAACCAACTCAATGGTACCTTAGATATTGGCAATGCCAACAGCGACCGTCTGCAGCTTATTGATTTGGAGAATAATCAAATAACTGACTTCACACAGAAAAATGCAGATACCAAAATCAGAGTCATACTAGTTGGCAACTCCATGTGTCTCGAAACAGGAGCTACTTCAGAAAGTTACTGCAAAAAAAATGAATCCAGTGTCTCGTTCCCGTATTCAACAGCAACAAATAATTGTCAACCTCTTCTTTGCAGTTCCTATCAGCTTTCAAGCCCAAACTGCAAATGTGCACACCCCTATACTGGGATTCTGATTTCTAGAGCTGCTAGTTTCTCAAACTTAGAAAACACAAGTTATTATAAGGTTCTTGAACAGACTCTGATGGCTGCTTTTCGGTCCCAAAATCTTCCAGTGGATTCAATTTCTCTTAGCAACCCCTTCAAGAATTCCTCCACTGATTATTTTCAACTGAACCTGAATGTCTTCCCCTCTGGAAGTGATCATTTCAACCTAACTGGAGTTTCAAGTATTGCCTTTGTGCTTAGCAAGCAGATTTATGAACCCCCAGAATTTTTCATCCCTTACTTCTTCAAGGGTGATAAATATGGATACTATTCAGGAGAATCTTCATCATCAAAATCACATACAGGGTTTATAGTTGGTGCATTAGTTGCTGTTTTGGTCCTTTTGGTAGTCTCCATCCTCGCAGGAACATATGCAATACGCCAAAAGAAAAGAGCAAGAAAATCTAAGGACTCTAATCCTTTTGCAAACTGGGAAGAGAACAAGAACAGTGGTAGTGCTCCTCAGCTAAAAGGAGCACGTTGGTTTTCTTTCGATGAGCTAAAGAAATACAGTAACAACTTTTCAGAAGCCAATACTATTGGAGCTGGTGGCTATGGAAAGGTTTACCAAGGTGTTCTTCCCTCTGGGGAACTGGTGGCCATCAAGCGGGCTGCGCAAGAATCCTTGCAAGGTGCTATTGAATTCAAAACTGAGATTGAGCTTCTTTCAAGGGTCCATCATAAAAATCTTGTTGGTCTTGTGGGTTTCTGTTTCGAGAAAGGAGAACAAATGCTGGTATACGAGTATATTCCAAATGGCTCTGTGATGGCAAGTCTTTCAGGAAGATCGGGAATCAGGATGGATTGGATGAGGAGGCTAAAAGTAGCAGTGGGTGCAGCCAGAGGTCTGGCCTATCTTCATGAACTTGCCAACCCACCAATTATACACAGGGACATAAAATCAAGCAATATCCTTCTCGACCACTACTTAAATGCCAAAGTCGCCGATTTCGGTCTCTCTAAACTCATCGACAGTGATAGGGGCTACATCATCACTCAAGTCAAAGGAACAATGGGATACTTGGATCCTGAATATTACATGACCCAGCTGTTGACCGAAAAAAGTGATGTATATAGCTTTGGAGTTCTAATATTGGAGCTGGTAACAGGAAGAAAGCCAATAGAGCGAGGAAAATTCATTGTTAGAGAGGTTCTGAGAGTAATGGATAGATCAAAAGAGTTGTACAACCTTGATGTCATTCTAGACCCAACCATAACCAAAGAAAAAGCCCAGAAAGGCTTAGAGAAGTTTGTAGACTTGGCATTAAGGTGCGTCAAAGAAAATGCAGCTGAGAGGCCTACAATGGCTGAAGTGGTAAAAGAGATTGAGAATATAATGGAGCTTGCTGGTTTGAACCCCACTGCTGATTCAGAAACTACATCGGCAACTTATGAGGGTGCTGGCAGTGGTAAAGTCCACCATCCTTATAGTGATGAAGACTTCGCCTATACCGGGGATTTTCCATCAGTATAG 2853 0.4238 MDQQNKAFLPLLLLFQLVLLGAALNSNEDFIALKSLSEFLENTPASWAGRDPCADRWEGIKCTNSRVTSMTLQSMNIGGRLSDDILSLSELQTLDLSYNKDLTGPIPDEIGNLTNLQTLILVGCSFSGPIPDSIGSLKQLTFLALNLNQFTGKVPRTLGSLSKIDWLDIADNQIEGSIPVSDDEGPGLDMLLTAQHFHFGNNKLSGEIPAQLFSSNMKLKHLLLHNNQLNGSIPDTVGLVKTLDLIRLDRNQLSGEVPSNISNLTELSKLYLSNNKLTGPMPDLTPLSGLHYVELSNNTFDSAGIPSWASNLPFLTTLQLEKTGLQGEVPVSLFNQPNLETVEMRNNQLNGTLDIGNANSDRLQLIDLENNQITDFTQKNADTKIRVILVGNSMCLETGATSESYCKKNESSVSFPYSTATNNCQPLLCSSYQLSSPNCKCAHPYTGILISRAASFSNLENTSYYKVLEQTLMAAFRSQNLPVDSISLSNPFKNSSTDYFQLNLNVFPSGSDHFNLTGVSSIAFVLSKQIYEPPEFFIPYFFKGDKYGYYSGESSSSKSHTGFIVGALVAVLVLLVVSILAGTYAIRQKKRARKSKDSNPFANWEENKNSGSAPQLKGARWFSFDELKKYSNNFSEANTIGAGGYGKVYQGVLPSGELVAIKRAAQESLQGAIEFKTEIELLSRVHHKNLVGLVGFCFEKGEQMLVYEYIPNGSVMASLSGRSGIRMDWMRRLKVAVGAARGLAYLHELANPPIIHRDIKSSNILLDHYLNAKVADFGLSKLIDSDRGYIITQVKGTMGYLDPEYYMTQLLTEKSDVYSFGVLILELVTGRKPIERGKFIVREVLRVMDRSKELYNLDVILDPTITKEKAQKGLEKFVDLALRCVKENAAERPTMAEVVKEIENIMELAGLNPTADSETTSATYEGAGSGKVHHPYSDEDFAYTGDFPSV 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1174 950 FunFam Leucine-rich repeat protein kinase family protein 598 709 - -
Bisa04g1174 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Bisa04g1174 950 ProSiteProfiles Leucine-rich repeat profile. 266 288 IPR001611 GO:0005515
Bisa04g1174 950 Pfam Protein kinase domain 635 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1174 950 CDD STKc_IRAK 640 905 - -
Bisa04g1174 950 Gene3D Phosphorylase Kinase; domain 1 604 709 - -
Bisa04g1174 950 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 710 919 - -
Bisa04g1174 950 FunFam Leucine-rich repeat family protein 28 183 - -
Bisa04g1174 950 SUPERFAMILY RNI-like 283 380 - -
Bisa04g1174 950 Gene3D Ribonuclease Inhibitor 284 398 IPR032675 -
Bisa04g1174 950 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Bisa04g1174 950 Gene3D Ribonuclease Inhibitor 184 283 IPR032675 -
Bisa04g1174 950 PANTHER RECEPTOR-LIKE PROTEIN 55 35 905 - -
Bisa04g1174 950 SMART serkin_6 634 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1174 950 ProSiteProfiles Protein kinase domain profile. 634 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1174 950 FunFam Leucine-rich repeat protein kinase family protein 184 283 - -
Bisa04g1174 950 SUPERFAMILY Protein kinase-like (PK-like) 620 913 IPR011009 -
Bisa04g1174 950 ProSitePatterns Protein kinases ATP-binding region signature. 640 662 IPR017441 GO:0005524
Bisa04g1174 950 Gene3D Transferase(Phosphotransferase) domain 1 710 923 - -
Bisa04g1174 950 SUPERFAMILY L domain-like 32 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1174 Bisa-ChrBisa04 33409114 33419274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1174 1 949 Receptor kinase-like Gene Family AT5G49760 54.603 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bisa04g1174 Pkinase 1.4e-46 CL0016