Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1170 ATGGTGAACCCTCCAAGAGAGGAGATAAGGAAGATCAGAGCACAGCTTCAAGAGTATGGTCAAGTGGGTGACGCCAATGTGTTCTACTGGTTCCAGAACCGCAAGTCCAGAAGCAAGCACAAGCTTCGCAACCTTCAAAACTCCAAGACTACTACTAATAACAATAATAACAACCAAACAACCCCACAGCCACCACAAGCTCACCAACAAAACCCTCCTTGTCTGATCCCTCAGATTACCAAACCACCCTCACCCTCTTCCTCTTCCTCTGAGAGATCTCCTCCTAAGGAGATAATACCCCTTTACAAGGTATTCTCAATTGGCTTCTCTTCCGACGTGGTACCCAATTCCCCCACTGCAGGTTCTGTGAATAACCAGACCTATTTCCAGACCCACACTGAGACCACTCTGCCCGAGCCTTTTTTCTTCCCAGTGACTCATAATGGTACTGGAGGAGGAGGAGCTGGTACTATGAGTCAAGGGTTTTGCTTCTCTGAGCTTTCTAATGTGGTTCATGCTCAACCTCATCAACAAGAAAATGTTGGGCCTTGCACTAGTCTCTTGCTTAGTGAGATGATGAACCACCATGGAGCTTTAAAGAAAGAAACTGAACAAGAGAAGGACATGAAAATAATGCACCACCAACACCCCCATCTTAGTTTCTGCGTCACTTCTTCCGCCAGTCCTACCATCCACAGTACTGCTACTATCCCTTCCATCACCACCACCACCACTGTTACTGTTCCATCCCCCATCACCCAAATTCAAGGTGCAGGTGAGCCAGCTGGTGCGGTGAAATCTACGGTGTTCATTAACGACGTCGCATTCGAGGTGGCTGTGGGTCCCTTCAACGTGCGCGAGGCCTTCGGCGCTGACGCCGTTCTCGTCCACGCGTCAGGTCACCCGGTTCTTACCAACGAGTGGGGCGTCACCCTCCAGTCACTCCAGCACGGCGCATTTTATTATCTGGTGCGCACATATAGAATGATGAAGGAGGTGATGGTGTACTGTACTGTTTAG 1020 0.4941 MVNPPREEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRNLQNSKTTTNNNNNNQTTPQPPQAHQQNPPCLIPQITKPPSPSSSSSERSPPKEIIPLYKVFSIGFSSDVVPNSPTAGSVNNQTYFQTHTETTLPEPFFFPVTHNGTGGGGAGTMSQGFCFSELSNVVHAQPHQQENVGPCTSLLLSEMMNHHGALKKETEQEKDMKIMHHQHPHLSFCVTSSASPTIHSTATIPSITTTTTVTVPSPITQIQGAGEPAGAVKSTVFINDVAFEVAVGPFNVREAFGADAVLVHASGHPVLTNEWGVTLQSLQHGAFYYLVRTYRMMKEVMVYCTV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1170 339 SUPERFAMILY Homeodomain-like 3 43 IPR009057 -
Bisa04g1170 339 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 325 IPR044557 GO:0003700|GO:0050793
Bisa04g1170 339 MobiDBLite consensus disorder prediction 45 65 - -
Bisa04g1170 339 Pfam Homeodomain 3 40 IPR001356 GO:0003677
Bisa04g1170 339 MobiDBLite consensus disorder prediction 66 80 - -
Bisa04g1170 339 CDD homeodomain 3 41 IPR001356 GO:0003677
Bisa04g1170 339 MobiDBLite consensus disorder prediction 38 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1170 Bisa-ChrBisa04 33237733 33239459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1170 138 324 Wox Gene Family AT2G33880 33.796 7.67e-24 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bisa04g1170 Homeodomain 1.2e-06 CL0123