Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1168 ATGGCTATTCGTAGTAATCATCATCATCATACACCAATGAGCTTTGGCTCAATAGTACTCGAATCATCGTCTCCAAAGCTGACGGATCAAAGTTGGAATCTCAGTCGTAGTCGAATTAACGACGATATTAGAAATAATCATGCAGCTTCCGAAGGTATTCTTGAGAATGTATGGGCTAGAATTACGAGCAATGATGGCGGAATAACGGAAAATGCACCGGAATCTTCCAAATCATGGGAGGATCTTCCGAATCTCGATGGAAGAGATGGGTCCATGGAGATTCTGCAAAGGCTTCCGAGTTTAGGAAGATGGGTGTCAATGGGATCTGAGGCATGGGAAGAAATCTTAGAAGGTCTTCCACAAACACAAGACTCAAGCAGTAACAACTTGGAAATTTGCAGAGACATTGAATCCAATTATAAGAAGGAAGGTGAAAGACGGTACAGAGGAGTGAGAAGAAGGCCGTGGGGAAAATATGCAGCAGAAATCAGAGACTCAGCAAGGAAAGGTGCGAGGCTATGGCTTGGGACATTTGAGACAGCTGAGGAAGCAGCTTTGGCTTATGATAAGGCAGCCTTGAGAATTAGAGGTCCTAAGGCGTACCTTAATTTCCCATATCAGACTGTTGAAAATGCTTTACGATTTGACCACAAACAAAGTACTAGCTGTGCTTCTTCAAATTGTTGTATTTCCAGGAAAAGAAGATTGAGGGAAGGGGAAGAAGTTGGTGGCGTGATGAATGAAGAACCTGAAACTAAAAGGATGGCGAGCTTGGAATTGGAAGGCGTGCTGGAGAATGAACTAGATGTTCTTGTGCTTCAGGACTTAGGAAATGATTACTTGGAGAGTTTGCTGTCTTCATTTTGA 867 0.4302 MAIRSNHHHHTPMSFGSIVLESSSPKLTDQSWNLSRSRINDDIRNNHAASEGILENVWARITSNDGGITENAPESSKSWEDLPNLDGRDGSMEILQRLPSLGRWVSMGSEAWEEILEGLPQTQDSSSNNLEICRDIESNYKKEGERRYRGVRRRPWGKYAAEIRDSARKGARLWLGTFETAEEAALAYDKAALRIRGPKAYLNFPYQTVENALRFDHKQSTSCASSNCCISRKRRLREGEEVGGVMNEEPETKRMASLELEGVLENELDVLVLQDLGNDYLESLLSSF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1168 288 CDD AP2 155 207 IPR001471 GO:0003700|GO:0006355
Bisa04g1168 288 ProSiteProfiles AP2/ERF domain profile. 147 205 IPR001471 GO:0003700|GO:0006355
Bisa04g1168 288 Gene3D AP2/ERF domain 146 207 IPR036955 GO:0003700|GO:0006355
Bisa04g1168 288 SUPERFAMILY DNA-binding domain 147 206 IPR016177 GO:0003677
Bisa04g1168 288 SMART rav1_2 147 211 IPR001471 GO:0003700|GO:0006355
Bisa04g1168 288 PRINTS Ethylene responsive element binding protein signature 171 187 IPR001471 GO:0003700|GO:0006355
Bisa04g1168 288 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Bisa04g1168 288 Pfam AP2 domain 147 197 IPR001471 GO:0003700|GO:0006355
Bisa04g1168 288 PANTHER DNA-BINDING DOMAIN 125 249 IPR044808 GO:0003700|GO:0009873
Bisa04g1168 288 FunFam Ethylene-responsive transcription factor 2 146 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1168 Bisa-ChrBisa04 33191278 33192144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1168 53 288 AP2-EREBP Transcription Factor Family AT4G18450 37.162 6.53e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa04g1168 AP2 2.2e-14 CL0081