Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1161 ATGCATTTCCCTTTGTTTATTCCTAAGACACTTGGGAGGTTTTGGCTATTCTTTATTCTGCTCGTCTCCTTTCTTCTCTTTAGTATTGGCTTGGGAGATGAAGCTACAGAAGAAGTTGATAAAGTTATTCCCATTGGTGCAATTATTGATGTTAATTCTCGCATTGGTAAAGAACAGCAAGTAGCTATGGAAATTGCAGCTCAGAATTATAATAACAGATCAAAGACTCACAAGCTGGCTCTCTATTTCCGGAACACCATGAAGGAACCCTTCAGAGCTACCTCTCTTGCTGAAGATTTGATTCAAATTCAGAAAGTGAAAGCGATCATAGGGATGCATACATGGCAAGAAGCAGCTCTTGTGGCTGGAGTTGGAAGCCAAGCTCAAGTTCCTGTCATATCCTTTGCATCACCTGCAATCATCCCTCCATTGACACCACTTCGCTGGCCTTTTCTGGTAAGACTATCCAACAATATCACTGCACAGATAAACTGCATTGCAGACATAGTGCATGCTTTTACTTGGCAAAGAGTAATAGCCATTTATGAAGATGATGGTTTTGGTGGTGGTGGAGAAAATGGGATGCTATCACTCCTCTCTGAGGCCCTCCAAGACTTCGGTTCCATAATCGACTACCGTTTAAGGCTCCCTCCAATTTCCATTTTGGCTGATCCGGGGAGTCTAATCCATAAAGAGCTGTTTAAGTTGATGGAACAAACTCAATCTAGGGTTTTCATTGTTTTGCAGTCATCTCTAGAAATGGTGACACATTTGTTCAGAGAGGCTTCTCGAATGGGACTTTTGGATAGAGATTCAGCTTGGATACTCCCGGAGCGCATAACTAACCTGCTTGACTCTATGGATGACAAGTCTGCTATTTCTCACATGGAAGGGTCTTTAGGAATCAAGACACTCTACGATGAAAAAAGCAGTGAGTTTCAAGATTTTCAAACTCAGTTTCGGAGAAGTTTTCGCGCCAAGAATCCCGAGGAAGACAATAGCAACCCGGGATTTTACGCTTTGCAAGCATACGATAGCATCGAAGTGATCATTCGAGCGGTAGAAAGAACGGAAAGTGAGAACAACAGAACCAACACAAATCCATTACTAGGAGAAATATTGTCTGGCAATTTCCATGGTTTAAGTGGGAAGATTCATTTTGAAGCAGGAGAGCTCTTGCAGGATCCAGTGTTGAGGATAGTGAATGTAGTAGGGAAGAGTTACAAGGAAATAGACTCTTGGACTCAAGAGCATGGGTTTGTTAGAAGATTGGGTGGTGTAGTACAATGGCCTGGGGATTTGGCGGGGAATAGGGTTCCAAAAGGCTGGAACATGCCTACTAAACAAAAGCGAATGAGAATTGCAGTTCCAGGAAGAACATCATTTTCCAAGTTTGTCAAGGTTGACTATGGAGAGGGAAAGAATCCACATATGTATAGTGGATTCTGTATTGAAATTTTTGAAAAGGTGCTTAAACTTTTGGAATATGACTTGCCCTATTACTTTGATCCCCTCAATGTAACTTATCCTGATCTGGTTCAACTTGTTTACAACAAGTTTGGTACCTTGAGAGGGTACCCAATCCAGAGTTCCATGGCAGTTGGAAGAGCCAGATCAGCACTGCTCTTTGGTTCACCTTCTCCTCTCTATTCTTTGCTCACAGTGAGGGAGAAAATGCACAGCAACTTATCTCGTGTGGTGATGGTTTCATGGCTCTTTCTAGTTATGATTCTGAACTCAAGCTACACTGCTAGCCTCTCTTCAATGCTAACAGTTCAACAACTTCGGCCAAATGTCACAAGCATTGAGTGGCTCAAGAAAAACAACATGAAAGTTGGCTGTGATGGTGACTCGTTTGTAAGGACGTACCTAGAAAATGTGGAAAAATTCAAGAAAGAAAACATCATAAACATTAGCAGTGAATACAGTTATGATGGCGATTTCAAAAACAACACAATAGCAGCTGCTTTTCTCGAGCTTCCTTATGAAAAAGTATACATCAATACATATTGCAAGGGCTACTCCAGCACCCCACCCACCACCAGATTCGGAGGACTAGGCTTTATGTTCCAAAAAGGCTCCCCAGTGGCCAAAGATGTTTCCAAGGCTATATTGCAGATGTCAGAAAACGGAGAACTGAAGAACTTGGAAGAAAAATGGTTTCATCCGTTAAACGGGTGCTCTAACAATACAACATCTAACGATACAGAAAGTTTGAAACTAGGAAGTTTATGGATTCTCTTTGTCATTTCTGGTGCCACTTCTACCATTTGCTTATTATTTTCTATCATCCAATCTCTAGGCTTCTGTCAACCACCTCAAAGTGAAGCTCAAGGAGGTAATGTCCCCACAAGTGATGAGAGTGTTTGGAGAAGAGCTGTTGAATTAGCTAAGCTGATTTATAGCAGAAAGTTTCATAAGGAAAGTGAGGCAAGGCATGATGGAACTGATAGTTCTTCCAGATGGGACTATTTTAGCAGTCCTGATACACCTATGCATCAGCACAATGCTGCTTCCTTAGTACCTACAGTTGTAGCTCACTTAGCTTCGCCTAGAACATCACTGTCTGGAGAACAGTTATCATGGGAGCTGCATTCAGAACATAATGATTTTGATTACATCACATACAACACTTTTTTATGTCAGAAGAAATTGACACATTTGAATGCATTTCTCAATAAATCACATGCATACATACCAAAGTGGTCCTCATCTGCTGCTTGCATCAAATGGATTGGAAAATATAGTCAATAA 2754 0.4132 MHFPLFIPKTLGRFWLFFILLVSFLLFSIGLGDEATEEVDKVIPIGAIIDVNSRIGKEQQVAMEIAAQNYNNRSKTHKLALYFRNTMKEPFRATSLAEDLIQIQKVKAIIGMHTWQEAALVAGVGSQAQVPVISFASPAIIPPLTPLRWPFLVRLSNNITAQINCIADIVHAFTWQRVIAIYEDDGFGGGGENGMLSLLSEALQDFGSIIDYRLRLPPISILADPGSLIHKELFKLMEQTQSRVFIVLQSSLEMVTHLFREASRMGLLDRDSAWILPERITNLLDSMDDKSAISHMEGSLGIKTLYDEKSSEFQDFQTQFRRSFRAKNPEEDNSNPGFYALQAYDSIEVIIRAVERTESENNRTNTNPLLGEILSGNFHGLSGKIHFEAGELLQDPVLRIVNVVGKSYKEIDSWTQEHGFVRRLGGVVQWPGDLAGNRVPKGWNMPTKQKRMRIAVPGRTSFSKFVKVDYGEGKNPHMYSGFCIEIFEKVLKLLEYDLPYYFDPLNVTYPDLVQLVYNKFGTLRGYPIQSSMAVGRARSALLFGSPSPLYSLLTVREKMHSNLSRVVMVSWLFLVMILNSSYTASLSSMLTVQQLRPNVTSIEWLKKNNMKVGCDGDSFVRTYLENVEKFKKENIINISSEYSYDGDFKNNTIAAAFLELPYEKVYINTYCKGYSSTPPTTRFGGLGFMFQKGSPVAKDVSKAILQMSENGELKNLEEKWFHPLNGCSNNTTSNDTESLKLGSLWILFVISGATSTICLLFSIIQSLGFCQPPQSEAQGGNVPTSDESVWRRAVELAKLIYSRKFHKESEARHDGTDSSSRWDYFSSPDTPMHQHNAASLVPTVVAHLASPRTSLSGEQLSWELHSEHNDFDYITYNTFLCQKKLTHLNAFLNKSHAYIPKWSSSAACIKWIGKYSQ 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1161 917 Gene3D - 39 160 - -
Bisa04g1161 917 Pfam Receptor family ligand binding region 60 404 IPR001828 -
Bisa04g1161 917 SMART GluR_14 451 723 IPR001320 GO:0015276|GO:0016020
Bisa04g1161 917 Gene3D - 161 334 - -
Bisa04g1161 917 CDD PBP1_GABAb_receptor_plant 45 424 IPR044440 -
Bisa04g1161 917 SUPERFAMILY Periplasmic binding protein-like I 40 443 IPR028082 -
Bisa04g1161 917 Pfam Bacterial extracellular solute-binding proteins, family 3 588 722 IPR001638 -
Bisa04g1161 917 Pfam Ligand-gated ion channel 555 753 IPR001320 GO:0015276|GO:0016020
Bisa04g1161 917 Gene3D - 669 728 - -
Bisa04g1161 917 FunFam Glutamate receptor 162 334 - -
Bisa04g1161 917 SUPERFAMILY Periplasmic binding protein-like II 439 722 - -
Bisa04g1161 917 Gene3D - 541 638 - -
Bisa04g1161 917 Gene3D - 445 522 - -
Bisa04g1161 917 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 559 764 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1161 Bisa-ChrBisa04 32989489 32997263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1161 19 760 Ion Channels AT4G31710 29.280 4.77e-87 296