Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1145 ATGGCTCATTACTTTTGTAACTCGATTTCCTCGTCTGAGAATGGAGAGATAGTGAAGTGCCATGGAAGCATAGGGAAGAAAGGCGAGTCTGACGTAAAAGCTTCGGCGGCTTTGAAGAGCCATAGCGAAGCAGAGAGAAGAAGACGAGAGAGAATCAATGGTCATCTTGCTACCCTTCGTTGTCTTGTGCCCTCCACTGAAAAGATGGATAAAGCCGCATTACTGGCTGAAGTTGTTAGACAAGTGAAGGCGCTGAAGAAGAATGCAGTTGAAGCAAGCCAAGGTATTCTTGTTCCATCCGATGCCGATGAAGTAAAAGTCGAAGCATACAATGACGACGAAGGAGAGGGATGGACATCTTACAGGGCATCTGTGTGCTGTGATTACCAGCCTGAGCTTCTATCTGATCTAAGACACTCCCTTGATTCCCTTCAACTACAGTTGGTGAGGGCAGAAATATCAACTCTGGGACACAGAGTGAAGAATGAATTTGTGTATACTTGCTGCGAAAGGAGGAACAATGTAAATAATGAAGAATGCCAACTTCTTGCAAGTAATGTTCACCAGGCACTAAGTTCTGTGCTGCAAAAGGCTTCAAGCTCGCTGGAATATCCCTAA 618 0.4515 MAHYFCNSISSSENGEIVKCHGSIGKKGESDVKASAALKSHSEAERRRRERINGHLATLRCLVPSTEKMDKAALLAEVVRQVKALKKNAVEASQGILVPSDADEVKVEAYNDDEGEGWTSYRASVCCDYQPELLSDLRHSLDSLQLQLVRAEISTLGHRVKNEFVYTCCERRNNVNNEECQLLASNVHQALSSVLQKASSSLEYP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1145 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 88 IPR036638 GO:0046983
Bisa04g1145 205 SMART finulus 42 91 IPR011598 GO:0046983
Bisa04g1145 205 CDD ACT_UUR-ACR-like 124 198 - -
Bisa04g1145 205 Coils Coil 134 154 - -
Bisa04g1145 205 PANTHER TRANSCRIPTION FACTOR BHLH30 21 200 IPR045847 GO:0003700|GO:0006355
Bisa04g1145 205 Gene3D - 31 94 IPR036638 GO:0046983
Bisa04g1145 205 Pfam Helix-loop-helix DNA-binding domain 40 85 IPR011598 GO:0046983
Bisa04g1145 205 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 36 85 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1145 Bisa-ChrBisa04 32591735 32594686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1145 33 165 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 44.853 2.00e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa04g1145 HLH 1.7e-09 No_clan