Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1106 ATGGCCGACGCCGTCAATCCCCGGAAATTAAAAGCCGCCGCCGCCCCCTCTACCTCGAAGACCAAGAACAGCAACCCCAATCTCTTGCTAGGCCGCTTCGAACTCGGGAAGCTCCTCGGCCACGGAACCTTCGCGAAGGTCTACTGCGCTCGAAACATCCGCACCAATGAAGGCGTCGCCATCAAGATCATCGACAAGGAGAAAATCCTCAGGGGAGGCCTCGTCGCGCACATCAAGCGCGAGATCTCGATCCTCCGACGCGTGCGCCACCCGAATATCGTCCAGCTCTTCGAGGTCATGGCGACGAAGGCCAAGATCTACTTCGTGATGGAATACGTGCGAGGCGGCGAGTTGTTCAATAAGGTCGCAAAAGGCCGATTGAAGGAGGAAGACGCGAGAAAGTATTTCCAGCAATTGATCTCCGCCGTCGGATTCTGTCACGCGAGAGGCGTGTACCATCGAGATCTCAAGCCGGAGAATCTGTTGTTGGACGAAAATGGCGATCTCAAGGTCTCCGATTTTGGACTTAGTGCGGTATCTGATCAAATCAGGCAAGACGGATTGTTTCACACTTTTTGTGGCACTCCTGCGTATGTGGCCCCTGAGGTTTTGGCTCGGAAAGGCTACGACGGCGCGAAGGTCGATCTCTGGTCATGCGGTGTCGTTTTGTATGTTTTAACAGCGGGATATTTGCCTTTCCATGATCAGAATGTGATGGCTATGTATAAGAAGATTTACAAAGGTGTATTCAGGTGTCCCAAGTGGTTCTCCCCTGAGTTAGCTCGTTTATGCATCCGTCTTCTTGATACGAACCCTGAAACGAGAATCTCTATTCCGGAGCTCATGGAGAATAAGTGGTTCAAGAAAGGGTTCAAACAAATTAAGTTCTATTTTGACGATGATAAGCTTTGTACTAATTTTGATGATAAGCTGGATTTTGGTAAAGGCGACGCAGATTCAATCTCGGACTATTCAATATCTGAGTCTGACTCGGAGTTGGAGACCAGGAGGAGGAACAATAATTCTTCACTGCCTAGACCAGCGAGTTTGAACGCATTCGATATAATTTCATTTTCTCCCGGCTTCGATCTCTCTGGGCTGTTCGAGGAAAGAGGGGACGACGAGAGGTTCGTGACGGGTGCTCCGGTGTCGGAGATCATATCGAAATTGGAGGAAATAGCAAAGTTGGTTAGTTTCACTGTGAGGAAGAAGGATTGTAGGGTGAGGTTGGAGGGTACAAGAGAAGGCGTGAAAGGGCCATTGTCGATTGCTGCAGAGATATTTGAGCTAACGCCTTCGTTGGTGGTAGTGGAGGTGAAGAAGAAAGGAGGGGATAAAGAAGAGTACGATCAATTCTGCAGCACTGAATTGAGACCAGGGTTGCAGAAGTTGATGATGGGCGATACTGCAACTTCTTCTCAGTCAGCTCCTGAACTTTCGCTATTCCCTTCGAGTTCTGATTCTGAAATGTCTCAAAGCGTGCCTTCAGACACTGAATTTGAAGGGTAA 1509 0.4924 MADAVNPRKLKAAAAPSTSKTKNSNPNLLLGRFELGKLLGHGTFAKVYCARNIRTNEGVAIKIIDKEKILRGGLVAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLKEEDARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLYVLTAGYLPFHDQNVMAMYKKIYKGVFRCPKWFSPELARLCIRLLDTNPETRISIPELMENKWFKKGFKQIKFYFDDDKLCTNFDDKLDFGKGDADSISDYSISESDSELETRRRNNNSSLPRPASLNAFDIISFSPGFDLSGLFEERGDDERFVTGAPVSEIISKLEEIAKLVSFTVRKKDCRVRLEGTREGVKGPLSIAAEIFELTPSLVVVEVKKKGGDKEEYDQFCSTELRPGLQKLMMGDTATSSQSAPELSLFPSSSDSEMSQSVPSDTEFEG 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1106 502 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Bisa04g1106 502 MobiDBLite consensus disorder prediction 1 23 - -
Bisa04g1106 502 SMART serkin_6 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1106 502 MobiDBLite consensus disorder prediction 466 502 - -
Bisa04g1106 502 CDD CIPK_C 351 462 - -
Bisa04g1106 502 CDD STKc_SnRK3 32 286 - -
Bisa04g1106 502 FunFam Non-specific serine/threonine protein kinase 347 465 - -
Bisa04g1106 502 ProSiteProfiles NAF domain profile. 345 369 IPR018451 GO:0007165
Bisa04g1106 502 Gene3D Kinase associated domain 1, KA1 345 466 - -
Bisa04g1106 502 Pfam NAF domain 347 403 IPR004041 GO:0007165
Bisa04g1106 502 Pfam Protein kinase domain 34 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1106 502 Gene3D Transferase(Phosphotransferase) domain 1 23 342 - -
Bisa04g1106 502 SUPERFAMILY Protein kinase-like (PK-like) 29 288 IPR011009 -
Bisa04g1106 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Bisa04g1106 502 FunFam Non-specific serine/threonine protein kinase 23 338 - -
Bisa04g1106 502 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 459 - -
Bisa04g1106 502 FunFam Non-specific serine/threonine protein kinase 24 112 - -
Bisa04g1106 502 ProSiteProfiles Protein kinase domain profile. 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1106 Bisa-ChrBisa04 31080153 31081661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1106 17 499 CBL-interacting serine-threonine protein kinases AT4G18700 74.897 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa04g1106 Pkinase 1.1e-72 CL0016