Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1104 ATGAGACGCTTTTTCAGATTCTTGATTATTCTGGCCCTGTTTGCTCTCGTTGATTCTTCCCCATGCAAAATTAGGGAACAAGACCGAGACCTTGTGTCCAGGGCCTTCAAATCAGTCTCTGGATTCAACGTTTCCTGGTTGTTCCAAACAGCAGATTCCAACTGTTCCATGATTAGTACCATAAAGCTTCCTTCCAAGAATCTTAGTGGGACTATCTCATGGGGGTTTCTGAAGAACCTCTCAAACCTGCAGGTTCTTGATCTTTCTGGGAATTCTCTGCAAGGTCACTTGCCTAGCTGGGTTTGGGCGAGTTCGAGCTTATTGGAAGTCGATCTTTCCAAGAACAGGTTCGGAGGTAGCATTGGGTTCGAAGCCGCCATTAAAAATGGCTCCTTTTTTTCCCTTCAAATGCTGAACCTCTCTCACAATAGGTTCACCAATAGGGTTCAGCTTTCTGGATTCTCTAGCCTAAAAGTTCTGGACCTTTCTCATAACAGTTTGAAATCTCTACCTACTGGCTTCCAAAGGCTAACCAAGCTATACCACCTAGACCTCTCGAGCTGCAATATCAAAGGAAATATCAAACCCATCTCTGTTTTGAAGTCACTGAACTACTTGGACTTGTCAAACAACGACTTGAATGGTAGTTTCCCTTCTGATTTCCCGAGTCTCCACAGCCTCCATTTTTTAAACATTTCTCGTAACCACTTCAGAGCATTAGTTAGTTTCGATGCGTATAGGAAATTCGGCAAATCAGCTTTCCTCCACGCCGGTAACAACTTCAATTACGAGGCATCCAAAACGGCGCCGTTTCGGCGTTCTTCCCATAAACAAAAACCCATCATTACCAAAAGACCTAAATCAAAATCAAAATCCAAAACTCTGATTCTTGCAGTGTCCTCTGCTTCGGGCTTCGTCATTGTCCTATTCTCCATCTGGGTATTTTGCATCTGCAGAAAGAAAAAGCAATTGGCTAAAAGAAACAAATGGGCGATCTCGAAGCCGGTCCCATCATCACTGGCCATCAAGTTCGAGAAATCTGGGCCGTTCGCTTTCGAGACCGAGTCGGGCACGTCGTGGGTCGCTGACTTGAAGGAGCCATCGTCTGCGCCGGTCGTGATGTTCGAGAAGCCGCTGATGAACCTGAGCTTCAAGGACCTGATCGCTGCCACGTCACACTTCGGGAGGGACTCGCAGCTCGCCGAGGGAAGATGTGGGCCCGTGTATAGAGCCGTCTTAGGAGACGTCCACGTGGCAATCAAAGTTCTCGAAAACGCTAGAGACGTAGATCATGATGACGCCGTGGCTCTGTTCCTTGACCTATCCAAGCTCAAGCACCCAAATTTACTGCCCCTCTCCGGTTACTGCATTGCAGGTAGGGAGAAGCTGGTTCTATACGAGTTCATGTCAAACGGCGATTTGAATAGGTGGATACATGAGCTACCAACGGGGGAAACTAACGTGGAGGATTGGAGTGGCGACACGTGGGAGATTCAAAGCGGCGTCGGTTCGCTGGTCTCTTCTCCGGAAAAGATGGGTTGGCTAACACGACACCGTATTGCCGTCGGGATAGCGCGTGGCCTGGCATATCTCCACCACGCGGGATCAAAGCCCGTGGTGCACGGCCACGTAGTCACTTCCAATATCCTACTCGCCGACGACTTCGAGCCCCGAATCGCCGATTTCGGGTTGCGAAAAATTGGGCGGCAAATTAACCCGAATTGTACCACCGAGACGGACGTTTACTGCTTCGGCGTTGTGCTTATGGAGCTCTTGACGGGGAAGCCCGGCACGGCGGAGACGGTGGTGTGGGTGAGGAAGCTCGTGAGAGAGGGGAACGGTGTGCAGGCGTTGGACGAGAGGCTGAGACTCGACGGCGGCAGCGGTGGCGAGTCGGAGAGGGAGATGGTGGAGAGTCTCCGAGTCGCGTACTTGTGTACGGCCGAGTCACCGGGGAAGAGGCCCACGATGCAGCAGGTCCTGGGTTTGCTCAAAGATATTCATGCCGCCGGCGGACTCGTCCCGAGTTAA 2031 0.5076 MRRFFRFLIILALFALVDSSPCKIREQDRDLVSRAFKSVSGFNVSWLFQTADSNCSMISTIKLPSKNLSGTISWGFLKNLSNLQVLDLSGNSLQGHLPSWVWASSSLLEVDLSKNRFGGSIGFEAAIKNGSFFSLQMLNLSHNRFTNRVQLSGFSSLKVLDLSHNSLKSLPTGFQRLTKLYHLDLSSCNIKGNIKPISVLKSLNYLDLSNNDLNGSFPSDFPSLHSLHFLNISRNHFRALVSFDAYRKFGKSAFLHAGNNFNYEASKTAPFRRSSHKQKPIITKRPKSKSKSKTLILAVSSASGFVIVLFSIWVFCICRKKKQLAKRNKWAISKPVPSSLAIKFEKSGPFAFETESGTSWVADLKEPSSAPVVMFEKPLMNLSFKDLIAATSHFGRDSQLAEGRCGPVYRAVLGDVHVAIKVLENARDVDHDDAVALFLDLSKLKHPNLLPLSGYCIAGREKLVLYEFMSNGDLNRWIHELPTGETNVEDWSGDTWEIQSGVGSLVSSPEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHVVTSNILLADDFEPRIADFGLRKIGRQINPNCTTETDVYCFGVVLMELLTGKPGTAETVVWVRKLVREGNGVQALDERLRLDGGSGGESEREMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHAAGGLVPS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1104 676 SUPERFAMILY L domain-like 39 241 - -
Bisa04g1104 676 Gene3D Ribonuclease Inhibitor 30 127 IPR032675 -
Bisa04g1104 676 Gene3D Transferase(Phosphotransferase) domain 1 572 671 - -
Bisa04g1104 676 ProSiteProfiles Protein kinase domain profile. 394 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa04g1104 676 FunFam Calmodulin-binding receptor kinase CaMRLK 133 243 - -
Bisa04g1104 676 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Bisa04g1104 676 Gene3D Transferase(Phosphotransferase) domain 1 469 571 - -
Bisa04g1104 676 Gene3D Ribonuclease Inhibitor 128 300 IPR032675 -
Bisa04g1104 676 FunFam Putative LRR receptor-like serine/threonine-protein kinase 355 468 - -
Bisa04g1104 676 SUPERFAMILY Protein kinase-like (PK-like) 371 664 IPR011009 -
Bisa04g1104 676 Pfam Leucine Rich Repeat 82 99 IPR001611 GO:0005515
Bisa04g1104 676 PRINTS Leucine-rich repeat signature 200 213 - -
Bisa04g1104 676 PRINTS Leucine-rich repeat signature 157 170 - -
Bisa04g1104 676 Gene3D Phosphorylase Kinase; domain 1 354 468 - -
Bisa04g1104 676 Pfam Protein tyrosine and serine/threonine kinase 398 566 IPR001245 GO:0004672|GO:0006468
Bisa04g1104 676 SMART LRR_typ_2 154 176 IPR003591 -
Bisa04g1104 676 SMART LRR_typ_2 200 223 IPR003591 -
Bisa04g1104 676 SMART LRR_typ_2 224 245 IPR003591 -
Bisa04g1104 676 SMART LRR_typ_2 80 104 IPR003591 -
Bisa04g1104 676 Pfam Leucine rich repeat 134 190 IPR001611 GO:0005515
Bisa04g1104 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 43 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1104 Bisa-ChrBisa04 31027059 31029883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1104 55 667 Receptor kinase-like Gene Family AT5G07280 31.507 1.11e-71 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Bisa04g1104 PK_Tyr_Ser-Thr 1.8e-20 CL0016