Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1065 ATGGGAGCACCAAGCGATGCAAATGGCATTAAGGGCAGAAAAAAATCATCATGCAGAGGACACCCCAGGTTCGTTGGAGTTCGTCAAAGGCCATCAGGACGATGGGTGGCTGAAATCAAAGACTCCCTTCAGAAGGTCAGGCTCTGGCTCGGAACATTCGACACACCCGAGGATGCCGCACGTGCCTACGACACCGCCGCACGTGCTTTGCGAGGTCCCAACGCCCGCACCAACTTCGATTTACCGGATCCCGCAACCTCCGCCGCAAATCGCGGAGGTAGTTGCACCTACTTGCCCGAGAATCTCGAGCCGTTTTCGTTTGAGGACACGTGTCAGCCGTTCAGCACAGAAACGGACCACGGACTTCTTGATCATGATGGAGCTGGAGGTGCTTATGCTATAGCAGGCAATAGTGCTAATGAGATAGCTAATTATGAATTGTCTTGGCAGGTGAACCAGGTTCCTGAAAATAACGGTTTGTTTGCCTCTTCAAATAATTCTCCATGGCCACTTTATGGAGTAATTGAATCTGAATGTACTAACCAAAATATGATGTATTCAGATTATCATGGGCCTTCAAGTAGCAATAGGACGTCAGAGCAGCAGCAATATGTGCAGTGGGAGAGTAATGGTTGGTTTAGTTGGGATCCTCTGCTCTATGTTTCTCCGGAGCTAGGTTGA 681 0.4949 MGAPSDANGIKGRKKSSCRGHPRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTPEDAARAYDTAARALRGPNARTNFDLPDPATSAANRGGSCTYLPENLEPFSFEDTCQPFSTETDHGLLDHDGAGGAYAIAGNSANEIANYELSWQVNQVPENNGLFASSNNSPWPLYGVIESECTNQNMMYSDYHGPSSSNRTSEQQQYVQWESNGWFSWDPLLYVSPELG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1065 226 CDD AP2 22 80 IPR001471 GO:0003700|GO:0006355
Bisa04g1065 226 MobiDBLite consensus disorder prediction 1 26 - -
Bisa04g1065 226 FunFam ethylene-responsive transcription factor RAP2-11 22 81 - -
Bisa04g1065 226 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Bisa04g1065 226 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Bisa04g1065 226 SUPERFAMILY DNA-binding domain 23 80 IPR016177 GO:0003677
Bisa04g1065 226 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 91 - -
Bisa04g1065 226 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Bisa04g1065 226 Pfam AP2 domain 22 72 IPR001471 GO:0003700|GO:0006355
Bisa04g1065 226 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Bisa04g1065 226 Gene3D AP2/ERF domain 23 81 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1065 Bisa-ChrBisa04 27362731 27363594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1065 11 79 AP2-EREBP Transcription Factor Family AT5G19790 65.714 7.43e-26 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa04g1065 AP2 1e-13 CL0081