Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1040 ATGGATTCAAGAAATGCAATCATGAATCAAATTTTGGAGGCGCTAGTAGATCCCAGAATTCATATGGTCGGATTGTGTGGGCTTCCTGGAGTGGGCAAAACTACCTTAGCCAAAGAAGTAGCAAGGCAAGCAAAGGAGCAGAACCTGTTTGACACGGTGGTCTGGGTGATTGTTGCACAAGATCCTGACCTTCTGAAAATTCAAACACAAATTGCAAACAATTTAGGAATGAAATTTGATGTAGACAGTTTAAATGCTAGAGCAAGTCATTTAGGAAAAAGGTTGAAGAAAGAAAAGAACCTACTTATGGTATTAGATGATCTTTGGGATCAACTTGATTTGGCTGAAGTTGGGATTCCCTTTGATTATGATGTTGGGTTGAATTTACTTCATGATGTACATTCCATGAAAGAAGCTCAAGATGCATTAGATGGTCTGTTAATCTTGAGAACACCGACTATTCTTCGAGTGGAACTAGAAGAGGATGAAAGATATAACGTGAAAGACATTAACAAAAGAATAGAATTGGTATTTTTAGCAAAGGATGGTCAAAATGTAGAGGAAACAATCAAAGTGAGAAGCCCCAAATCCAACACTGGGATTAGGACTGAGGCTTTGAAGACCATTGATGATATCAGGGACCTCGTCCACAAGAAATGTGGAAGAGTTGTCTCTTCTACTGACATTGTCGCTCTTGCCGGATGTGATTCCATTGTCCTGGTAATATCTCTTTCTCTTTTCAGTAATTAA 750 0.3893 MDSRNAIMNQILEALVDPRIHMVGLCGLPGVGKTTLAKEVARQAKEQNLFDTVVWVIVAQDPDLLKIQTQIANNLGMKFDVDSLNARASHLGKRLKKEKNLLMVLDDLWDQLDLAEVGIPFDYDVGLNLLHDVHSMKEAQDALDGLLILRTPTILRVELEEDERYNVKDINKRIELVFLAKDGQNVEETIKVRSPKSNTGIRTEALKTIDDIRDLVHKKCGRVVSSTDIVALAGCDSIVLVISLSLFSN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1040 249 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 4 230 - -
Bisa04g1040 249 Pfam NB-ARC domain 6 122 IPR002182 GO:0043531
Bisa04g1040 249 SMART AAA_5 19 161 IPR003593 GO:0016887
Bisa04g1040 249 Pfam Peroxidase 195 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa04g1040 249 SUPERFAMILY Heme-dependent peroxidases 195 240 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bisa04g1040 249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 115 IPR027417 -
Bisa04g1040 249 Gene3D - 176 246 - -
Bisa04g1040 249 Gene3D - 2 148 IPR027417 -
Bisa04g1040 249 PRINTS Disease resistance protein signature 22 37 - -
Bisa04g1040 249 PRINTS Disease resistance protein signature 95 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1040 Bisa-ChrBisa04 25738429 25746711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1040 125 240 Peroxidase AT1G71695 30.597 1.39e-07 49.7