Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1034 ATGATCGAAACGGTTCGTCTCGCTACTTTTTCTTATTCAGCTGAGCTCAAGTGGTGCTTTCTGATGCATTTTTGGCCTGTGTTTAATTCGATGGGTTCGATGAAATACTGTGTTTCTACTTTCGTGTACGGAGTAGCTGGTGGGAAAAAAGATTCTATTGTCAGACTTGTTGATGTGGTGATCATGACAAGGGCTGTGCGCAATAGGATACTCAAGGATGCGAATGGTGATATTAGTGATCATCTACGCAACCACATCCATTTAACAAATTGCATCCACTTGAAGAATCATATGCACAAGAACAGCCCCATTATTGCTGATAGGTCGCTTATGAGGGACCTTGTTGTGCTGCAGAGGTCACGTTCTCTGAGAGACCCTTCAGCAAGTCCTCCTTCATGGCATTCGCCTTCTATAGTTGATTTGCTTTCCAAGAGGGTTGAAAATGATGCCATGGTTCAGGAGGGAAGAAGATCAGTAGGAATTGAACGCCGGAAAGAAGGAAGGAGGTTGTCGGGAACCTCCCCGCCCCTGGCTAGTTTAGGTACATCAAAAGTTGCTCCTGGTGAGGTGAGCAGGAGTAATGATGGAAGGCCAGCAAGTAGAGATCGTAGTAGCAGGAGTGGAATTGGGGATGGGAGGAACATTGGAAGAGAAGAATCTGCCCGGAAGAGTGACATGCCTGATCATTTGGGTCCTAATGAAGAACAACTTCTCAGTCAACTTTGGAAAGATTTGTCTGAAGAAGTTAAAAGCAAACAAAGGGGGAAGCATGTTCGAGATGTTCAAGTTAAGACCCTTTCTGAGCAGCTGAATGATGTTCCACTAGATAGTGATGATTTAGCATCTTCGAACAATAATCTTCGTGGAAAGTTTCCAAGGCAGGAGAAAATTATTGAGGACCCAGAAACCAGCATGCGTGGTCAGAGCAACAGAATGAATAGGGTAAAAAGGCGTAAATTTCGAAGTGCAAGAAGAGCTATGGCTTCTGTGGCATCTAGAGATACTGGAGCTGAGAAAGAACTGTCTGTAGCTTCCAATTCATTAGCTCATGGTTCAGCCCACCATAAAAATCACATGGAAGAGGCAGATGATTATGCTGATGAAAATGTTACTAGGGCACCCAAAAATGGGTGCGGCATTCCTTGGAACTGGTCTAGAATTCATCACAGAGGTAAAACTTTCCTTGACATGGCTGGAAGAAGTTTGTCTTGTGGTTTATCTGACTCGAGGCTAAAGAAAGGGGCAATGGATGCCGATGGAAGCAATATTTCTAACATGCCTGTAGCATTTGACGAATCAAGCTCATTTACCAAGTCTGATGCAGAGGCACTGCCTTTACTAGTTGAGGCGTCTGGATCTCAGGGAAGCACTGAGAATGCTTGCTGGGGCCATGAATATTCTGGGGAACTTGGTATTTTTGCTGATAATTTATTCAACCATGATGTTGATTCTGACCTCGCATCTGAAGCTAGATCTGGTGATCAGCATAAGTTGAGAGGGAATCGCCACAGCAGGCACCAAAGCTTGACACAAAAGTATTTTCCACGAACCTTCAGAGATTTAGTTGGGCAGAATTTGGTGGCACAAGCTCTTTCAAATGCAGTCATGAGAAGGAAAGTTGGGATTTTGTATGTCTTTTATGGACCCCATGGCACTGGAAAAACTTCCTGTGCCCGCATATTTGCCAGAGCTTTAAATTGTCATTCTTCAGAACACCCGAAACCATGTGGCTTCTGCAATTCTTGCATAGCGCATGATATGGGAAAGAGTAGAAGTATAAGGGAAGTTGGTCCAGTCAGTAATTTTGACTTTGAGAGCATCATGGATCTACTTGACAACATGATTGTTTCCCAGCTTGCATCACAGTATAGAGTGTTTATTTTTGATGACTGTGATACTTTGTCAGCTGATTGCTGGAGTGCCATATCAAAGGTCATTGATCGAGCACCTAGACGTGTGGTTTTTATACTTGTCAGTTCAAGTCTTGATGGATTGCCTCATATAATCATATCCAGGTGTCAGAAATTCTTTTTTCCAAAGCTGAAAGATTCAGATATTATGTATACATTGCAGCGGATTGCAGCCAAAGAAGGTCTAGAAATTGATAAGGATGCCCTGAAACTAATTGTATCAAGATCAGATGGATCATTGAGAGATGCTGAGATGACCCTTGAACAACTTAGTTTGCTAGGGCAGAGAATATCAGTTCCCCTTGTTCAGGAATTGGTAGGGCTAATCTCTGATGAGAAATTGGTCGATCTTCTTGATTTGGCATTATCTGCGGACACAGTTAACACTGTGAAGAATTTGAGAGTGATAATGGAAACTGGTGTTGAGCCATTAGCTTTAATGTCGCAGCTTGCTACTGTAATTACTGATATACTTGCTGGGACCTATGATTTCACAAGAGAAAGGCAGAGAAGGAAGTTTTTTCGGAGACAGCCATTATCGAAAGAACACATGGAAAAGCTACGACAAGCTTTGAAAACTTTATCAGAGGCTGAGAAGCAGTTGAGGATGTCCAATGACAAACTAACCTGGCTGACAGCTGCATTGCTTCAACTTGCTCCTGACCAGCAATATATGTTGCCTACTTCTTCTGATAATAGTTTCAATCACAGTCCCTTGGCCCTAAAAAATCCAGATGGGAGAGACGCAGCCAGAAGAGCAAGTACTAGTGTTGAAATTCCTCGCAAAGAGAGGCGTTTGTCAATGGATGCTAGAATAGAGAATCTCCAAGCTGGAAGTTCAGCTGATGGTATGACAAAGGGTTTTAGTTCAGATCATAAAAGAGCTGCTGTGGCTGATTTTGCTCCTCAACAGGCATCTTCCCATGTCACTGATATGATTAGGATGAATGACAGGCAGGCTTTTAGTAAAAACCGTAAAGGAATTGAAGAGATATGGTTAGAGGTGCTTGACAGGATTCAGGTTAATGGTCTCAAAGAGTTATTATATCAAGAAGGCAAGCTAATATCTGTTAGTTTTGGTGCAGCTCCAACTGTGCAGCTCATGACTAGTTCCCAACAGACCAAATCTACTGCTGAGAAGTTCAGGGGCCATGTCTTACAAGCATTTGAATCTGTCCTTGGATCTTCTGTAACTTTAGAAATTAGATGCGAATCAAACAAAGAGGCAGGAGCTGGGTTTCAACTGCCCCTTGTACCACCCGCCCCTAAAGATAGTTCTGTTGAAAAGAAGATGGGTGAAATTATCGAAGAAGCAGCTTCTCCAATGGAGCACAAGAGTAATGCACAGCAGACTGATGTTAACAAAAAGCCAATTGTGACTTCACACCTAGAAAGAAGGAAGCTTAGGGAACAGAGTCAGTGTCGAAGTATTGTAAGAAGTAAGGTATCTCTTGCTCATGTAATCCAGCAGGCTGAAGGACGTACACATCGAAGTGGTTGGTCAAAACGGAAAGCTGTTTCCATTGCCGAAAAGCTTGAACAAGAGAATCTGAGGCTGGAGCCAAGATCAAGGAGCTTGCTATGTTGGAAAGCATCAAGAGTTACCCGGCGGAAGCTTTCACGTTTGAAGATTAGGACCCGAAAGCCTCATGCATTGCTGAACCTGGTGTCATGTGGGAAATGCCTCACGACTAAATCTCCAAGTGTTGAGCTGGGATCTAGTGCCAGATTATTGGTCTTGTATTATGTCGAAGTCAAGGTCGAAGTTCAGGGCATAACGTTGTCGTTTGGGATGAAGGGAATATCGGGTCTAGCAATTTTGAAAGTAAGATAATCTTTGGAGCTAGGGTCACTAGTGATCGCCAAAGATTACTGTGAGAACTGTGAATGGCCTAAAGGTCGAAGCCAAGATCAGAACAAGACACTTTCTCTTGGCTCAGGAAGATCAAATTCATATGGCTACAAGGTTTTCGTCCAAGAATGTCAACCATGA 3903 0.4312 MIETVRLATFSYSAELKWCFLMHFWPVFNSMGSMKYCVSTFVYGVAGGKKDSIVRLVDVVIMTRAVRNRILKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPIIADRSLMRDLVVLQRSRSLRDPSASPPSWHSPSIVDLLSKRVENDAMVQEGRRSVGIERRKEGRRLSGTSPPLASLGTSKVAPGEVSRSNDGRPASRDRSSRSGIGDGRNIGREESARKSDMPDHLGPNEEQLLSQLWKDLSEEVKSKQRGKHVRDVQVKTLSEQLNDVPLDSDDLASSNNNLRGKFPRQEKIIEDPETSMRGQSNRMNRVKRRKFRSARRAMASVASRDTGAEKELSVASNSLAHGSAHHKNHMEEADDYADENVTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLKKGAMDADGSNISNMPVAFDESSSFTKSDAEALPLLVEASGSQGSTENACWGHEYSGELGIFADNLFNHDVDSDLASEARSGDQHKLRGNRHSRHQSLTQKYFPRTFRDLVGQNLVAQALSNAVMRRKVGILYVFYGPHGTGKTSCARIFARALNCHSSEHPKPCGFCNSCIAHDMGKSRSIREVGPVSNFDFESIMDLLDNMIVSQLASQYRVFIFDDCDTLSADCWSAISKVIDRAPRRVVFILVSSSLDGLPHIIISRCQKFFFPKLKDSDIMYTLQRIAAKEGLEIDKDALKLIVSRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGTYDFTRERQRRKFFRRQPLSKEHMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYMLPTSSDNSFNHSPLALKNPDGRDAARRASTSVEIPRKERRLSMDARIENLQAGSSADGMTKGFSSDHKRAAVADFAPQQASSHVTDMIRMNDRQAFSKNRKGIEEIWLEVLDRIQVNGLKELLYQEGKLISVSFGAAPTVQLMTSSQQTKSTAEKFRGHVLQAFESVLGSSVTLEIRCESNKEAGAGFQLPLVPPAPKDSSVEKKMGEIIEEAASPMEHKSNAQQTDVNKKPIVTSHLERRKLREQSQCRSIVRSKVSLAHVIQQAEGRTHRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKIRTRKPHALLNLVSCGKCLTTKSPSVELGSSARLLVLYYVEVKVEVQGITLSFGMKGISGLAILKVRXSLELGSLVIAKDYCENCEWPKGRSQDQNKTLSLGSGRSNSYGYKVFVQECQP 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1034 1300 MobiDBLite consensus disorder prediction 864 884 - -
Bisa04g1034 1300 FunFam DNA polymerase III subunit gamma/tau 503 680 - -
Bisa04g1034 1300 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 509 911 - -
Bisa04g1034 1300 SMART AAA_5 540 681 IPR003593 GO:0016887
Bisa04g1034 1300 MobiDBLite consensus disorder prediction 195 230 - -
Bisa04g1034 1300 CDD HLD_clamp_pol_III_gamma_tau 681 744 IPR045085 -
Bisa04g1034 1300 Gene3D - 499 678 IPR027417 -
Bisa04g1034 1300 MobiDBLite consensus disorder prediction 153 170 - -
Bisa04g1034 1300 NCBIfam DNA polymerase III subunit gamma/tau 507 855 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Bisa04g1034 1300 Gene3D - 682 744 - -
Bisa04g1034 1300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 544 728 IPR027417 -
Bisa04g1034 1300 MobiDBLite consensus disorder prediction 153 242 - -
Bisa04g1034 1300 SUPERFAMILY post-AAA+ oligomerization domain-like 752 855 IPR008921 GO:0003677|GO:0006260
Bisa04g1034 1300 Pfam DNA polymerase III subunits gamma and tau domain III 737 857 IPR022754 GO:0003887
Bisa04g1034 1300 Coils Coil 817 844 - -
Bisa04g1034 1300 FunFam DNA polymerase III subunit gamma/tau 682 744 - -
Bisa04g1034 1300 Pfam DNA polymerase III, delta subunit 524 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1034 Bisa-ChrBisa04 25589671 25599076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1034 507 793 Core DNA Replication Machinery Family AT1G21690 22.917 1.73e-12 68.6