Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1019 ATGGCTGAGAATTCCGTAACGCACGACGTCGTTTTGAACGTCAACGGCGACGCCAACCGCTCCGCCTCCAAACCCGATCAAAACTCCGGCATCTCCGTTTCTGTTCCCTTCCTCCAAAAGCTGGTGGCGGAGTTGGTGGGGACCTACTTTCTGATATTCGCAGGGTGTGCGGCGGTGGTGGTGAACAAGAACAACGACAATGTGGTGACGCTGCCGGGGATTTCCATAGTGTGGGGGCTGGCGGTGACGGTGCTGGTTTACTCCGTCGGACATATATCCGGCGCCCATTTCAACCCCGCCGTCACCATCGCTTTTGCTTCCACCGGAAGGTTCCCCCTCAAACAGGTGCCAATTTATGTAGTGACTCAGGTTATTGGATCTACCCTTGCAAGTGGAACTCTGAGACTTCTTTTTAACGGCAAAGAAAACCAGTTTACAGGGACACTTCCACAAGGATCAGACCTCCAAGCCTTTGTCATTGAATTCATCATCACTTTCTACCTCATGTTCGTCATCTCTGGCGTCGCCACTGACAACAGAGCAATTGGTGAGCTGGCTGGTCTGGCCGTGGGGTCTACGGTGCTGCTGAATGTGATGTTTGCAGGAAAAATAACGGGAGCATCGATGAATCCGGCAAGGAGCCTAGGGCCGGCAATTGTGTCACACAAGTACACAGGGCTATGGATATACCTGATCTCACCTGTGGCGGGTGCAGTGGCAGGGGCATGGGTGTACAACCTCATAAGGTACACAGACAAGCCCTTGCGTGAGATCACAAAGAGTGCCTCCTTCCTCAAAGCTGGTGCCTCCAAGTGA 816 0.5319 MAENSVTHDVVLNVNGDANRSASKPDQNSGISVSVPFLQKLVAELVGTYFLIFAGCAAVVVNKNNDNVVTLPGISIVWGLAVTVLVYSVGHISGAHFNPAVTIAFASTGRFPLKQVPIYVVTQVIGSTLASGTLRLLFNGKENQFTGTLPQGSDLQAFVIEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGKITGASMNPARSLGPAIVSHKYTGLWIYLISPVAGAVAGAWVYNLIRYTDKPLREITKSASFLKAGASK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1019 271 Pfam Major intrinsic protein 34 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1019 271 NCBIfam MIP family channel protein 43 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1019 271 SUPERFAMILY Aquaporin-like 33 259 IPR023271 -
Bisa04g1019 271 CDD MIP 39 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1019 271 PANTHER AQUAPORIN NIP2-1 26 265 IPR034294 -
Bisa04g1019 271 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Bisa04g1019 271 Gene3D Glycerol uptake facilitator protein. 6 260 IPR023271 -
Bisa04g1019 271 FunFam Aquaporin NIP1-1 4 258 - -
Bisa04g1019 271 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1019 271 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1019 271 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1019 271 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1019 271 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1019 271 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1019 Bisa-ChrBisa04 25171285 25174887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1019 39 271 Major Intrinsic Protein MIP AT5G37820 62.232 3.36e-102 299