Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1018 ATGGCTGAGAATTCCGTAACGCACGACGTCGTTTTGAACGTCAACGGCGACGCCAACCGCTCCGCCTCTAAACCCGACCAAGACTCCGGCACCTCAGTCTCTGTTCCCTTCCTCCAAAAGCTGGTGGCGGAGTTGGTGGGGACCTACTTTCTGATATTCGCAGGGTGTGCGGCGGTGGTGGTGAACAAGAACAACGACAATGTGGTGACGCAGCCGGGGATTTCCATAGTGTGGGGGCTGGCGGTGACGGTGCTGGTTTACTCCGTCGGACATATCTCCGGCGCCCATTTCAACCCCGCCGTCACCATCGCTTTTGCTTCCACCGGAAGGTTCCCACTCAAACAGGTGCCAATTTATATACTGACTCATGTTATTGGATCCACCCTTGCAAGTGGAACTCTGAGACTTCTTTTTAACGGCAAAGAAAACCAGTTTACGGGGACACTTCCACAAGGATCAGACCTCCAAGCCTTTGTCATTGAATTCATCATCACTTTCTACCTCATGTTCGTCATCTCTGGTGTCACCACCGACAACAGAGCGATTGGTGAGCTGGCTGGTCTGGCCGTGGGGGCTACGTTGCTGCTGAATGTGATGTTTGCAGGAACAATAACAGGAGCATCGATGAATCCTGCAAGGAGCCTAGGGCCAGCAATAGTGTCACACAAGTACACAGGACTATGGATATACCTGATCTCACCTGTGGCGGGTGCAGTGGCAGGGGCATGGGTGTACAACCTCATAAGGTACACAGACAAGCCCTTGCGTGAGATCACAAAGAGTGTCCCCTTCCTCAAAGCTGGTGCCTCCAAGTGA 816 0.5306 MAENSVTHDVVLNVNGDANRSASKPDQDSGTSVSVPFLQKLVAELVGTYFLIFAGCAAVVVNKNNDNVVTQPGISIVWGLAVTVLVYSVGHISGAHFNPAVTIAFASTGRFPLKQVPIYILTHVIGSTLASGTLRLLFNGKENQFTGTLPQGSDLQAFVIEFIITFYLMFVISGVTTDNRAIGELAGLAVGATLLLNVMFAGTITGASMNPARSLGPAIVSHKYTGLWIYLISPVAGAVAGAWVYNLIRYTDKPLREITKSVPFLKAGASK 271
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1018 271 NCBIfam MIP family channel protein 43 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1018 271 CDD MIP 39 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1018 271 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Bisa04g1018 271 Gene3D Glycerol uptake facilitator protein. 5 258 IPR023271 -
Bisa04g1018 271 PANTHER AQUAPORIN NIP2-1 26 264 IPR034294 -
Bisa04g1018 271 SUPERFAMILY Aquaporin-like 34 258 IPR023271 -
Bisa04g1018 271 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1018 271 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1018 271 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1018 271 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1018 271 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1018 271 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa04g1018 271 Pfam Major intrinsic protein 33 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa04g1018 Bisa-ChrBisa04 25152251 25156960 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1018 39 271 Major Intrinsic Protein MIP AT5G37820 60.944 1.24e-98 290