Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g1002 ATGGCCTATTGCAAACGTAAAGAAGAACTTCCTTTTAAGGAGGCCTCTGTCGCTCTTCTTTCTTTCCCTCTAATTAAGAGTTCTTCTCAAACCCATAATATTACTGCTGAAACGATGACTAGCTGTGATGCATGGAAGCCTTTTCTTGCAATGATAGCTATTGATTTTGCTCTCGCAGTAGTGAATATTTGCCTCAAGAAGTCCCTTGATGAAGAAATGAACCATTTGGTTTTCATCACTTACAGGTTGGCCACTTCTACTATTTTCTTAGCACCCATCGGCTACTTTTGGGAAAGAAACGGGAGACCAAGGCTCACATTTCGAATTTTGTGTTACCTCTTCTTCAGTGCCATTGTTGGGACATCAGTCACACAGTATTTCTTCCTTGTGGGAATTCAATACACCTCTGCTATCTTTGCTTGTGCCTTTATCAATATGGTGCCTGTGCTCACATTCATCATGGCATTGCCATTTGGGTTAGAGAAAGTGAACATAAAATACAACAGTGGGAGGGCAAAGATAGTTGGGGCAGTGGTGTGCATTGGAGGAGCATTGTTATTGACATTGTACAAAGGAATGCCTCTGTTCAGTTACTCTCACTCTGAGTCTCTGGCACCAGTCTCCCAAAACTCTGTAGTGAAGTTGGGTTCTCCCATAAATACACAGAGATGGACCATTGGTGTGATAGCTCTGATCCTAGGAACCCTGTTTTGGTCATCATGGTATCTTGTGCAATCAAACATAGGGAAGAGGTACCCATGCCAGTATTCCAGCACAGCCATAATGACCTTCTTTGGAACCATCCAATCAGCTGTTCTCAGCTTCGCCACCGGAAGGGACCTGTCAATGTGGGTTCTCAAAGGGAAGACGCAAATCATCACTGTTTTGTATTCTGGGATGGTTGGATCAGGGTTGTGCAATGTGGGAATGACATGGTGTGTGAATAAGAGGGGTCCTGTGTTCACTGCAGCATTCAGCCCTCTTGTTCAGATTTTGGCAGCTATGATTGATCTCCCTGTCTTGCATGAACAACTTCATCTTGGAAGCGTTTTGGGTTCCATATTGGTGATGATCGGATTATACATTCTTCTATGGGGTAAGAACAAGGAGATGCAGAACACAGTGACGAAGCTGGTCCAAGAAGCTGAAGAAATCAAGAAACAAGAGCCTCAAATACAAAAAATCACAGTGTCCAGTGAATCACGATGTCCTTGA 1215 0.4354 MAYCKRKEELPFKEASVALLSFPLIKSSSQTHNITAETMTSCDAWKPFLAMIAIDFALAVVNICLKKSLDEEMNHLVFITYRLATSTIFLAPIGYFWERNGRPRLTFRILCYLFFSAIVGTSVTQYFFLVGIQYTSAIFACAFINMVPVLTFIMALPFGLEKVNIKYNSGRAKIVGAVVCIGGALLLTLYKGMPLFSYSHSESLAPVSQNSVVKLGSPINTQRWTIGVIALILGTLFWSSWYLVQSNIGKRYPCQYSSTAIMTFFGTIQSAVLSFATGRDLSMWVLKGKTQIITVLYSGMVGSGLCNVGMTWCVNKRGPVFTAAFSPLVQILAAMIDLPVLHEQLHLGSVLGSILVMIGLYILLWGKNKEMQNTVTKLVQEAEEIKKQEPQIQKITVSSESRCP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g1002 404 PANTHER WAT1-RELATED PROTEIN 46 377 IPR030184 GO:0016020|GO:0022857
Bisa04g1002 404 Pfam EamA-like transporter family 49 188 IPR000620 GO:0016020
Bisa04g1002 404 Pfam EamA-like transporter family 226 364 IPR000620 GO:0016020
Bisa04g1002 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 81 191 - -
Bisa04g1002 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 369 - -
Bisa04g1002 404 Coils Coil 368 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g1002 Bisa-ChrBisa04 24305494 24309699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g1002 45 298 Nodulin-like Gene Family AT3G30340 51.181 1.11e-87 265