Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa04g0991 ATGTTTAATCAACTATACTTCTGCGTGGACTGGAAAATCCGTCTGAAAGTTCCTCGCCCGATCCACAGAGCCGCGTGTTGCGGGAGCTTTTGTATCCTTTCTTTTTTTGTTGGGACAATGCCTCGCAAGGTGAATTATGGACTTGATTATGATGACGACTATGATGACTATGATGACTATGAAGACTATGATTATGATGTTGACATGGAAGAACATGGCGAGGGACATAAAACTGATAAAAAGCAAGAGAATACTGGGCTTTGGCGATGCTCCATTTGCACCTACGACAATGATGAGAGTATGACTGCTTGTGATATTTGTGGTGTTGTACGTCAGCCTCTAGTTGACACAGGAGCTTCCAACAGTCACAAAAAAGTTAATGGCATATGCAAAAATTCTGGAGCATCCAAATTGGCCAAGTCTCTTTTTGCATCACTGCCACAACAGATGCCCAAAGAGGGTTTGTTGTTTCTAAAGCAGGGTGATGGTTTTCTGACGGAAGATGGCAGTAACTTCTACAAGTTTGCAAATGCCCATGGAGAATTTTCTGAATTTCATAAAATTTTTAGTACTCAAAGCCATCACCATCTAAACATAGCCCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTAACCAATGGACTGCGATCTTCCAAAATGGGATTGAAAGGAACATTTACTAACTCTAAAAATTCTCACGTTTCATCAAGCATTACACAGAAGAATGAATTTAAAGTACAGTCAAATGCTGAAAGGTCAGACAGCCCATCTTCTTTGGTCCAGAAAGGCAGGCAGGACAGTTTGGCTGAGAGCAAGCTTTCCAAGACTGTAGCAGTTGATCTGGAAACAAAAAATAAAACTTCAAACAGCTTATTAGAATCTTCTGTAAAGGGCAAAGGTAAAAAGGTGAATAAAACAAAGTCTGCAGAAGAAGGCAGAAACAATATTCAATCAAATGAAGAATTGTCGAGTAGCTTGTCTGCACAGCTAAAAATCGAAGGCAGTGATGATGAAACTAATTGCTCTTCTAGCAAAGATGTCAAACCTCAAAGTAGTTTCAACAACAAGGCTGTGGATGTAAGATCTGGAAGGTCAAATAACACCAATGCCAAAGGACCTCGTCCACATTTGCCCTATAAACCAGAAACATGGATGCTTCCTCAACAAGCTGAAGATGCATTGACTCAGTTGAATCTTGCAGTTGTTGGCCATGTTGATTCTGGGAAGTCAACACTCTCGGGTAGACTATTACACCTATTGGGACGAATTACCCAGAAAGAAATGCACAAATATGAAAAGGAGGCCAAGATACAGGGTAAGGGATCTTTCGCTTATGCTTGGGCACTGGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACTATGACGGTGGCTGTTGCGTATTTTGATACTAAGAAATATCATGTTGTTGTTCTTGACTCCCCGGGCCATAAAGATTTTGTACCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATATTGGTTATTGATGCCTCAGTTGGTTCATTTGAATCAGGTATGGATGTTAGCAAAGGACAAACAAAGGAGCATGCTCAGCTTATCAGAAGTTTTGGTGTTGACCAGGTTATAGTTGCAGTAAATAAGATGGATGCTGTGGCATACTCCAAAGATCGATTTGATTTGATTAGACAGCAATTGGGAGTGTTTCTTCGCTCTTGTGGTTTCAAAGATTCTTATGTGTCATGGATTCCCTTGAGCGTAATAGAAAATCAAAATTTGGTGACATCTCCTTCTGATCCTCTTTTCAAATCCTGGTATAAAGGACCTTATCTGTTAGATGCAATTGATTCACTCCAACCTCCTACTAGAGAATTCTCAAAGCCTCTACTAATGCCAATATGTGATGTCATCAAGTCTACACTTGGGCAGGTGTCTGCTTGTGGTAAATTGGAAGCTGGAGCTCTTCGGAGTGGGTCAAAGGTCCTAGTTATGCCTTCAGCTGTTCTGGGAACAGTACGCTCATTGGAGCGCGATTCTAATGCTTGCACTATTGCAAGAGCGGGAGATAATGTAGCTGTCACATTGAATGGTGTGGATGCAAGTCATGTAATGGCCGGAGGCATGTTATGCCATCCTGATTTTCCCGTTGCAGTTGCAAAACATTTGGAGTTGAAGGTGCTTGTGTTGGAAGGTGCAAATCCCATATTGGTAGGCTCGCAGTTAGAGTTTCATATTCACCATGCCAAGGAGCCTGCCAGAGTTTCAAGACTATTTTCAGTACTTGATCCAAAGACTGGGAAGGTGACAAAGAAATCCCCTCGCTGTCTCATTGCGAAGCAACGTGCAGTAATTGAGATAATTTTGCAGGAGCCAGTCTGTGTTGTAGAATTCTCTAGTTGTAAAGCTCTTGGAAGGGTGTCTTTAAGAGCATTAGGAAGAACAATTGCCGTTGGAGTTGTGACGCGAATAATCGAAGAGCAAGAGTAA 2481 0.4168 MFNQLYFCVDWKIRLKVPRPIHRAACCGSFCILSFFVGTMPRKVNYGLDYDDDYDDYDDYEDYDYDVDMEEHGEGHKTDKKQENTGLWRCSICTYDNDESMTACDICGVVRQPLVDTGASNSHKKVNGICKNSGASKLAKSLFASLPQQMPKEGLLFLKQGDGFLTEDGSNFYKFANAHGEFSEFHKIFSTQSHHHLNIAPFKFDVPSPDDVVTNGLRSSKMGLKGTFTNSKNSHVSSSITQKNEFKVQSNAERSDSPSSLVQKGRQDSLAESKLSKTVAVDLETKNKTSNSLLESSVKGKGKKVNKTKSAEEGRNNIQSNEELSSSLSAQLKIEGSDDETNCSSSKDVKPQSSFNNKAVDVRSGRSNNTNAKGPRPHLPYKPETWMLPQQAEDALTQLNLAVVGHVDSGKSTLSGRLLHLLGRITQKEMHKYEKEAKIQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGSFESGMDVSKGQTKEHAQLIRSFGVDQVIVAVNKMDAVAYSKDRFDLIRQQLGVFLRSCGFKDSYVSWIPLSVIENQNLVTSPSDPLFKSWYKGPYLLDAIDSLQPPTREFSKPLLMPICDVIKSTLGQVSACGKLEAGALRSGSKVLVMPSAVLGTVRSLERDSNACTIARAGDNVAVTLNGVDASHVMAGGMLCHPDFPVAVAKHLELKVLVLEGANPILVGSQLEFHIHHAKEPARVSRLFSVLDPKTGKVTKKSPRCLIAKQRAVIEIILQEPVCVVEFSSCKALGRVSLRALGRTIAVGVVTRIIEEQE 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa04g0991 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 636 IPR027417 -
Bisa04g0991 826 Gene3D - 387 620 IPR027417 -
Bisa04g0991 826 SUPERFAMILY Translation proteins 618 712 IPR009000 -
Bisa04g0991 826 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 396 627 IPR000795 GO:0003924|GO:0005525
Bisa04g0991 826 FunFam Translation elongation factor EF-1 623 712 - -
Bisa04g0991 826 ProSiteProfiles Zinc finger RanBP2 type profile. 84 113 IPR001876 -
Bisa04g0991 826 CDD HBS1-like_II 626 709 - -
Bisa04g0991 826 Gene3D Translation factors 624 712 - -
Bisa04g0991 826 FunFam Elongation factor 1 alpha-like protein 389 620 - -
Bisa04g0991 826 Pfam Elongation factor Tu GTP binding domain 399 615 IPR000795 GO:0003924|GO:0005525
Bisa04g0991 826 MobiDBLite consensus disorder prediction 220 271 - -
Bisa04g0991 826 CDD HBS1_C_III 713 821 - -
Bisa04g0991 826 Gene3D Translation factors 716 826 - -
Bisa04g0991 826 SUPERFAMILY Ran binding protein zinc finger-like 84 111 IPR036443 -
Bisa04g0991 826 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 718 822 IPR009001 -
Bisa04g0991 826 MobiDBLite consensus disorder prediction 312 339 - -
Bisa04g0991 826 MobiDBLite consensus disorder prediction 346 374 - -
Bisa04g0991 826 Pfam Elongation factor Tu C-terminal domain 714 821 IPR004160 -
Bisa04g0991 826 SMART zf_4 86 110 IPR001876 -
Bisa04g0991 826 MobiDBLite consensus disorder prediction 291 382 - -
Bisa04g0991 826 PANTHER TRANSLATION FACTOR 395 821 - -
Bisa04g0991 826 CDD EF1_alpha 400 619 - -
Bisa04g0991 826 ProSitePatterns Zinc finger RanBP2-type signature. 88 107 IPR001876 -
Bisa04g0991 826 PRINTS GTP-binding elongation factor signature 479 489 IPR000795 GO:0003924|GO:0005525
Bisa04g0991 826 PRINTS GTP-binding elongation factor signature 540 549 IPR000795 GO:0003924|GO:0005525
Bisa04g0991 826 PRINTS GTP-binding elongation factor signature 459 467 IPR000795 GO:0003924|GO:0005525
Bisa04g0991 826 PRINTS GTP-binding elongation factor signature 495 506 IPR000795 GO:0003924|GO:0005525
Bisa04g0991 826 PRINTS GTP-binding elongation factor signature 400 413 IPR000795 GO:0003924|GO:0005525
Bisa04g0991 826 FunFam elongation factor 1-alpha isoform X4 716 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa04g0991 Bisa-ChrBisa04 23921704 23949655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa04g0991 186 824 Eukaryotic Initiation Factors Gene Family AT5G10630 59.688 0.0 743